Pairwise Alignments

Query, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

Subject, 805 a.a., DNA gyrase, B subunit (RefSeq) from Shewanella loihica PV-4

 Score = 1151 bits (2978), Expect = 0.0
 Identities = 567/805 (70%), Positives = 666/805 (82%), Gaps = 1/805 (0%)

Query: 1   MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD 60
           MSEN +YDSSSIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+C+D
Sbjct: 1   MSEN-SYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCND 59

Query: 61  ITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 120
           + + IH D S+SV+D+GRGIPV +H EEGVSAA+VIMTVLHAGGKFDDNSYKVSGGLHGV
Sbjct: 60  VIITIHADGSVSVKDDGRGIPVAIHPEEGVSAAQVIMTVLHAGGKFDDNSYKVSGGLHGV 119

Query: 121 GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKN 180
           GVSVVNALSEKL LT+RR GK++EQ Y  G P AP+A +GD+  TGT I F PSAETF +
Sbjct: 120 GVSVVNALSEKLKLTIRRDGKLYEQFYTMGEPDAPIAEIGDATNTGTEIRFWPSAETFSD 179

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQ 240
             F +DILAKR+RELSFLNSGVGI L DER  K+EFFKYEGG+ AFV+YLN NKTPVN +
Sbjct: 180 TLFHFDILAKRVRELSFLNSGVGIRLIDERDNKDEFFKYEGGISAFVDYLNLNKTPVNKE 239

Query: 241 VFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIE 300
           +FHF  +R+DG+ VEVA+QWND F EN+ CFTNNIPQRDGGTHL GFR++LTR+LNSY++
Sbjct: 240 IFHFVQEREDGITVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRAALTRNLNSYMD 299

Query: 301 QEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFA 360
           +EG  KK K + TGDDAREGLTA+ISVKVPDPKFSSQTKDKLVSSEVK+AVEQ M +   
Sbjct: 300 KEGFNKKGKTSATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKSAVEQTMGEKLG 359

Query: 361 DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS 420
           D+LLENPNEAK +VGK+IDAARAREAARKAREMTRRKGALD+ GLPGKLADCQEKDPALS
Sbjct: 360 DYLLENPNEAKLIVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEKDPALS 419

Query: 421 ELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGI 480
           E+Y+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKM+SSQEV TLITALGCGI
Sbjct: 420 EIYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI 479

Query: 481 GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVK 540
           GR+EY+ DK RYHNI+IMTDADVDGSHIRTLLLTFFFRQ+PEL+ERGY++IAQPPLYKVK
Sbjct: 480 GRDEYDPDKTRYHNIVIMTDADVDGSHIRTLLLTFFFRQMPELIERGYVFIAQPPLYKVK 539

Query: 541 RGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLS 600
           +GKQEQY+KDD A+ EY+T  AL+   +H  + APA+SG  LE LV ++R V     RL 
Sbjct: 540 KGKQEQYLKDDPALTEYLTNLALDGGEIHPSQDAPAMSGAPLEKLVYQYREVEAIFDRLE 599

Query: 601 RLYPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQKSGLAYNASLREDKERN 660
           + +P  LTE  +Y P ++ + L D A ++ W   + A L  ++  G  ++A    D ER 
Sbjct: 600 QRFPIMLTERMLYQPGLSNDILADEAKVKQWCDNYVAALTEAESGGFIFSAEAFLDPERQ 659

Query: 661 VWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIVE 720
           V+LP+V +  HG+ ++  F+ DF  S+DY+ +  +   L  L+ EG YV+RGER K I  
Sbjct: 660 VYLPKVTVRKHGIDTHYLFSYDFLQSSDYQRMTALAEALEGLIEEGGYVKRGERMKEISS 719

Query: 721 FKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFN 780
           F + LDWLMN++ +   IQRYKGLGEMNP+QLWETTMDP  RRMLKVTIEDAIAADQ+F 
Sbjct: 720 FVDALDWLMNDSKRGLYIQRYKGLGEMNPEQLWETTMDPESRRMLKVTIEDAIAADQLFT 779

Query: 781 TLMGDAVEPRRDFIESNALSVSNLD 805
            LMGD VEPRRDFIESNAL+V+NLD
Sbjct: 780 CLMGDQVEPRRDFIESNALNVANLD 804