Pairwise Alignments

Query, 367 a.a., DNA replication and repair protein from Pseudomonas putida KT2440

Subject, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

 Score =  273 bits (698), Expect = 5e-78
 Identities = 148/367 (40%), Positives = 215/367 (58%), Gaps = 11/367 (2%)

Query: 1   MSLRRIMVTAVRNLHPVTLLPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPV 60
           M L R+M+   RN+    +  S   N L G NGSGKTSVLEA++LLG  RSF+S+    +
Sbjct: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60

Query: 61  IQYEQAACTVFGEVQLTEGGTSN------LGVSRERQGEFTIRIDGQNARSAAQLAELLP 114
           IQ E +   V G +   E   S+      +G++++R G   ++I GQ  +  AQLA++LP
Sbjct: 61  IQNECSELFVHGRI--CEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILP 118

Query: 115 LQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDPA 174
           LQLI+P+ F LL   PK RR F+DWGVFH EP F  AW R ++  +QRN+ L+       
Sbjct: 119 LQLIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQ-SYR 177

Query: 175 SQAAWDRELCLASAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELQE 234
             + WD+EL   + +ID++R +Y+  LK V E+     +    + L YYRGW+KD+  Q 
Sbjct: 178 ELSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQS 237

Query: 235 VLASSLLRDQQMGHTQAGPQRADLRLRLAGNNAADILSRGQQKLVVCALRIAQGHLVSQA 294
           +L  +  RDQQ+G+T +GP +ADLR+++      D+LSRGQ KL+VCALR+AQG  +++ 
Sbjct: 238 ILEKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTEL 297

Query: 295 RRGHCIYLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHV 354
               CIYL+DD  SELD   R+ L   L+    QVF++ +    + +    +     FHV
Sbjct: 298 TGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVAD--MLDESSKTFHV 355

Query: 355 EQGRITQ 361
             G I Q
Sbjct: 356 AHGVIEQ 362