Pairwise Alignments

Query, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

Subject, 509 a.a., chromosomal replication initiator protein, DnaA (NCBI) from Rhodospirillum rubrum S1H

 Score =  369 bits (946), Expect = e-106
 Identities = 212/500 (42%), Positives = 295/500 (59%), Gaps = 21/500 (4%)

Query: 6   WQQCVELLRDELPAQQFNTWIRPLQ-VEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLG 64
           W +    L+ E     + TW+ P+  V A   E+R+  P RF+ DWV   Y  R+  L  
Sbjct: 28  WDRVRGFLKREFGDSAYRTWVVPMTLVAAVEGEVRLAVPTRFMRDWVMNHYGDRIRSLWA 87

Query: 65  ENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAASLAQTQAHKTAPAAAVEPVAVAAA 124
              S I   +  ++ S  + AP A        A  AS     A    PA A  P   A A
Sbjct: 88  AEDSSIR-YVDFIVESAPAPAPPARAGQDADRAEGAS---DPAAGQRPAEAGAPRPAARA 143

Query: 125 EPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFDTFVEGK 184
              +V  ++    +  A+ A AP   G  A                L+  FTFD FV GK
Sbjct: 144 SRTMVRVAAEGGAEG-ADSAPAPLDDGISAP---------------LDPRFTFDNFVVGK 187

Query: 185 SNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSER 244
            N+ A AAA +VAD+    +NPLFLYGGVGLGKTHLMHA+   + + +P+ +V+YL +E+
Sbjct: 188 PNEFAYAAAKRVADSTGVAFNPLFLYGGVGLGKTHLMHAIARGIREASPHRRVIYLSAEQ 247

Query: 245 FVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVI 304
           F+   ++AL+      FK  +RSV+ L++DDIQF + K+ +QEEFFHTFNAL++ G Q++
Sbjct: 248 FMHRFIRALRQQDTMSFKEQFRSVEVLMVDDIQFISGKDSTQEEFFHTFNALVDQGSQIV 307

Query: 305 LTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFI 364
           L++D+ P ++E +  RL+SR   GL   + P   E R+ IL  KA+   V +P     FI
Sbjct: 308 LSADKSPTDLENIGARLRSRMACGLVADLHPTTYELRLGILESKAEHMGVSVPEKVLEFI 367

Query: 365 AQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAE 424
           A +I SN RE+EGAL R+IAH+  +GRD+T+E  ++ L DLL   DK V+VD IQ+ VAE
Sbjct: 368 AHKIASNGREVEGALIRLIAHAQLVGRDLTLETAQDVLHDLLRTYDKRVTVDEIQKKVAE 427

Query: 425 YYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRKIN 484
           ++KI+++D+ S RR+R+VARPRQVAM L K+LT+ SLPEIG  FGGRDHTTV+HA RK+ 
Sbjct: 428 HFKIRLADMHSARRARAVARPRQVAMYLCKQLTSRSLPEIGKSFGGRDHTTVMHAVRKVE 487

Query: 485 ELKESDADIREDYKNLLRTL 504
           EL  +D    ED + L R L
Sbjct: 488 ELILADGTFAEDVELLRRML 507