Pairwise Alignments

Query, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

Subject, 475 a.a., chromosomal replication initiator protein DnaA from Phaeobacter inhibens DSM 17395

 Score =  340 bits (873), Expect = 5e-98
 Identities = 202/510 (39%), Positives = 291/510 (57%), Gaps = 43/510 (8%)

Query: 1   MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVY-APNRFVLDWVNEKYLGRL 59
           M+ + W +  + L   +    F TWI PL+     + + ++  P  F+ ++V++ +   +
Sbjct: 1   MTEDNWGRLRQRLLKTVGQNNFTTWIEPLEFTCVENGVAIFNVPTNFMGNYVSQNFADLI 60

Query: 60  LELLGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAASLAQTQAHKTAPAAAVEPV 119
           L  L  +G                         PV        A T A  TA  AA    
Sbjct: 61  LHELNMSGE------------------------PVQRLAFRVAANTAARPTAVDAA---- 92

Query: 120 AVAAAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFDT 179
              AA+ + ++       D    P A   +G G A +     +G     + L+  FTFD+
Sbjct: 93  --GAADDLPLDLDDEALTDL---PRARTATGHGAAPKD----QGETLQAAPLDPRFTFDS 143

Query: 180 FVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVY 239
           FV GK N+LA AAA +VA+     +NPL LYGGVGLGKTHLMHA+   L  +NP   V+Y
Sbjct: 144 FVVGKPNELAHAAARRVAEGGPVTFNPLVLYGGVGLGKTHLMHAIAWELTARNPELNVLY 203

Query: 240 LHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEG 299
           L +E+F+   V+AL+   + +FK  +RSVD L++DD+QF A K+ +QEEFFHTFNAL++ 
Sbjct: 204 LSAEQFMYRFVQALRERKMMDFKHLFRSVDVLMVDDVQFIAGKDSTQEEFFHTFNALVDQ 263

Query: 300 GQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELP-- 357
            +Q+I+++DR P EI+ LE+R++SR   GL V + P + E R+ IL  K  Q     P  
Sbjct: 264 NKQIIISADRAPGEIKDLEDRVRSRLQCGLVVDLHPTDYELRLGILQSKVAQQMQTYPDL 323

Query: 358 ---HDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVS 414
                   F+A RI +NVR LEGAL R+ A +  +GR+I +EL ++ L D+L   ++ ++
Sbjct: 324 RIADGVLEFLAHRISTNVRVLEGALTRLFAFASLVGREIDMELTQDCLADVLRASERKIT 383

Query: 415 VDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHT 474
           V+ IQR V+EYY I++SD++  +R RS ARPRQVAM L K+LT+ SLPEIG  FGGRDHT
Sbjct: 384 VEEIQRKVSEYYNIRMSDIIGPKRLRSYARPRQVAMYLCKQLTSRSLPEIGRRFGGRDHT 443

Query: 475 TVLHACRKINELKESDADIREDYKNLLRTL 504
           TV+H  R+I ELK  D  I ED + L R+L
Sbjct: 444 TVMHGVRRIEELKTIDGQIAEDVEMLRRSL 473