Pairwise Alignments

Query, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

Subject, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

 Score =  622 bits (1604), Expect = 0.0
 Identities = 326/507 (64%), Positives = 385/507 (75%), Gaps = 49/507 (9%)

Query: 1   MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLL 60
           M+V LWQQC+  L+DEL AQQF+ WIRPLQ E +G+ L +YAPNRFVLDWV +KYL  + 
Sbjct: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGETLVLYAPNRFVLDWVRDKYLNTIN 60

Query: 61  ELLGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAASLAQTQAHKTAPAAAVE-PV 119
           +   E     AP L   IGSR +S P                        APAA+ + PV
Sbjct: 61  QFFTEQMGSDAPKLRFDIGSRPASKP-----------------------AAPAASTKSPV 97

Query: 120 AVAAAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFDT 179
           A AA  P      S+ SF++  EPAA                     H S +N T+ FD 
Sbjct: 98  APAAKSP------SKPSFNSN-EPAATA------------------NHRSNMNPTYQFDN 132

Query: 180 FVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVY 239
           FVEGKSNQL +AAA QV++NP   YNPLFLYGG GLGKTHL+HAVGN ++K NPNAKVVY
Sbjct: 133 FVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTHLLHAVGNGIIKNNPNAKVVY 192

Query: 240 LHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEG 299
           +HSERFV DMVKALQ NAI EFKR+YRSVDAL IDDIQFFA K+RSQEEFFHTFNALLEG
Sbjct: 193 MHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEG 252

Query: 300 GQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHD 359
             QVILTSDRYPKEI+G+E+RLKSRFGWGLTVA+EPPELETRVAILM+KA ++ + LP +
Sbjct: 253 NHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILMRKAQESGINLPDE 312

Query: 360 AAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQ 419
            AFFIA+R+RSNVRELEGAL RVIA+++F GR ITI+ +RE+L+DLLALQ+KLV++DNIQ
Sbjct: 313 VAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQ 372

Query: 420 RTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHA 479
           +TVAEYYKIK++D+LSKRRSRSVARPRQ+AMALSKELTN SLPEIGD FGGRDHTTVLHA
Sbjct: 373 KTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIGDAFGGRDHTTVLHA 432

Query: 480 CRKINELKESDADIREDYKNLLRTLTT 506
           CRKI +L+E   DI+EDY NL+RTL++
Sbjct: 433 CRKIAQLREESHDIKEDYANLIRTLSS 459