Pairwise Alignments

Query, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

Subject, 444 a.a., chromosomal replication initiator protein DnaA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  160 bits (405), Expect = 9e-44
 Identities = 107/369 (28%), Positives = 185/369 (50%), Gaps = 14/369 (3%)

Query: 149 SGGGRAEQRTVQVEGALKHTSYLNRTFTFDTFVEGKSNQLARAAAWQVA----DNPKHGY 204
           SG G + Q     + A +        FTFDTF+  + NQ   A+A +VA    D     Y
Sbjct: 76  SGNGGSPQAAPAPKTARQLDYPFGARFTFDTFLSNRKNQFPVASAKEVARDGRDPHDRVY 135

Query: 205 NPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKV----VYLHSERFVADMVKALQLNAINE 260
           NP  + GG G GKTHL+ A+ N L +      +    V     RF  + + A    A  E
Sbjct: 136 NPFVVCGGNGNGKTHLLRAIANELSRSRDENAIFCGPVDELGTRF--EGLSATGAGAAQE 193

Query: 261 FKRFYRSV---DALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGL 317
            ++    +   + L++DD+Q    +   Q+E    F+   + G+Q++        +++ L
Sbjct: 194 RQQARSRLCAHEVLVVDDLQRLRDQPFLQDELTFAFDHFHDHGKQMVFACSGKLADLDFL 253

Query: 318 EERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEG 377
             +L+SR  WGL V +  P+L+ R+  + +++    ++L  + +  +AQR R   R L+G
Sbjct: 254 SPKLRSRLEWGLIVELREPDLDVRLKFIQQQSRSRNIQLSKEHSLTLAQRFRE-FRHLQG 312

Query: 378 ALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKR 437
            L +V A+   + RDI    + + L+   + +   ++ D +    AE + I   D++  +
Sbjct: 313 ILVKVGAYRQLVNRDIQDRELEQILRHTDSGKGNSLTPDAVIAATAEQFGIPARDIIGDK 372

Query: 438 RSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRKINELKESDADIREDY 497
           R + + + RQVAM L +EL   S P +G +FGG+DH+T ++A RKI +L++SD D++   
Sbjct: 373 RQQHIVQARQVAMFLCRELLGSSFPALGRVFGGKDHSTAMYAVRKIKQLQQSDKDMQLLV 432

Query: 498 KNLLRTLTT 506
            +L R   T
Sbjct: 433 TDLKRKCLT 441