Pairwise Alignments

Query, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

Subject, 437 a.a., chromosomal replication initiator protein DnaA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  154 bits (389), Expect = 6e-42
 Identities = 116/392 (29%), Positives = 184/392 (46%), Gaps = 23/392 (5%)

Query: 103 AQTQAHKTAPAAAVEPVAVAAAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVE 162
           AQ     TA    V   +VA   P  ++T+ R +          PPS    A +      
Sbjct: 52  AQALERFTAGVRDVVGTSVALVFPEGIKTTDRSTVQ--------PPSQPPLASESVACPF 103

Query: 163 GALKHTSYLNRTFTFDTFVEGKSNQLARAAAWQVADNP-KHGYNPLFLYGGVGLGKTHLM 221
           GA          FTFD F+  + NQ   AAA + A N  +  YNP  L G  G GKTHL+
Sbjct: 104 GA---------AFTFDAFITNRKNQFPLAAAREAARNGHQRTYNPFVLCGASGNGKTHLL 154

Query: 222 HAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFAR 281
            A+ N L         V+  S   + D     +  A+      +R   ALL+DD+     
Sbjct: 155 RALANELAALY-GTDAVFCGSAEELHDRYNTEERLAMRRTLCAHR---ALLLDDLHRLRA 210

Query: 282 KERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETR 341
               +EE    F+   + G+Q+         +++ LE  L+SR   GL V ++ P+L+ R
Sbjct: 211 LPDLREELTALFDHFYDHGKQMAFAYAGRLSDLDFLEAPLRSRLELGLIVDLKEPDLDVR 270

Query: 342 VAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRES 401
           V  +  +     ++L  +    +AQR     R L G L +V A+   +GRDI    + + 
Sbjct: 271 VRYIHARCAALSLQLAREHVLTLAQRCHE-FRHLSGLLLKVAAYRDMVGRDILDRELEQI 329

Query: 402 LKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSL 461
           L++  +  ++ V+ D I    AE++ +   D+LS +R + + + RQVAM L +EL   S 
Sbjct: 330 LRNTDSGPERAVAPDTIISAAAEHFGVTPRDILSDKRQQHIVQARQVAMFLCRELIGSSF 389

Query: 462 PEIGDMFGGRDHTTVLHACRKINELKESDADI 493
           P +G MFGG+DH+T ++A +KI +L+  + D+
Sbjct: 390 PALGRMFGGKDHSTAMYAVKKIKKLQYDNKDM 421