Pairwise Alignments

Query, 631 a.a., tRNA uridine 5-carboxymethylaminomethyl modification enzyme from Pseudomonas putida KT2440

Subject, 635 a.a., tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA from Synechococcus elongatus PCC 7942

 Score =  575 bits (1483), Expect = e-168
 Identities = 312/635 (49%), Positives = 416/635 (65%), Gaps = 8/635 (1%)

Query: 2   VDFPSRFDVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLV 61
           V     FDVIVIG GHAG EAALA+AR+G +TLLLT N++ +G   CNPA+GG  KS L 
Sbjct: 1   VPHTEEFDVIVIGAGHAGCEAALAAARLGCQTLLLTLNLDRIGWQPCNPAVGGPAKSQLA 60

Query: 62  KEIDALGGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWI 121
            E+DALGG +    D++ +Q RVLN  +GPAV A RAQ D+  Y AV++++LE QPNL +
Sbjct: 61  HEVDALGGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVIKQVLEQQPNLRL 120

Query: 122 FQQSCDDLIV-EQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPP 180
            +    DL++   D+V+GV T  G  F A++V+LTTGTFLGG I +G ++   GRAG+  
Sbjct: 121 REGMVTDLLIGPNDEVQGVTTYFGSSFRAKAVILTTGTFLGGCIWVGNKSMPAGRAGEFA 180

Query: 181 SIALAHRMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAEMHPRQ 240
           ++ L   ++ L     RLKTGTP R+D RSVD+S +  QPGD  +   SF   A +   Q
Sbjct: 181 AVGLTETLQRLGFETDRLKTGTPARVDKRSVDYSRLEPQPGDPEVRWFSFDPEAWVEREQ 240

Query: 241 VSCWITHTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEP 300
           + C++T T A TH++I  NL  +P+Y G I+  GPRYCPSIEDKI RFADKESHQ+FIEP
Sbjct: 241 LPCYLTRTTAETHKLIRDNLHLTPVYGGYIDAKGPRYCPSIEDKIVRFADKESHQIFIEP 300

Query: 301 EGLNTHELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLET 360
           EG +  ELY  G ST LP D+QL L++++ G+E+  ++RP YA+EYDY        +L T
Sbjct: 301 EGRDIPELYIQGFSTGLPEDLQLALLQTLPGLEDCVMLRPAYAVEYDYLPATQCLPTLMT 360

Query: 361 KVIGGLFFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLIT 420
           + + GLF AGQ+NGTTGYEEA AQG++AG NAA   QG+D+    R+ +YIG L+DDL T
Sbjct: 361 RRVEGLFSAGQLNGTTGYEEAAAQGIVAGINAARFVQGQDAIVFPREGSYIGTLIDDLCT 420

Query: 421 LGTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQR 480
              +EPYR+ TSR+EYRL+LR DNAD R+T  GRE+GLIDD+RWA F  K+  I  E+ R
Sbjct: 421 KDLREPYRVLTSRSEYRLLLRADNADQRMTPLGREIGLIDDRRWALFEQKQARIAAEQTR 480

Query: 481 LKSTWVRPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGGEAIDPQVA-- 538
           L    V+ +   GQAI  +   P+    +L +LL RP   Y  L EA G    DP +A  
Sbjct: 481 LTQQRVKEHDPVGQAIAQQTQAPIKGSATLADLLRRPNFHYIDL-EAHG--LGDPSLAIA 537

Query: 539 --EQVEIRTKYAGYIDRQQDEIARLRASEDTRLPVDIDYTTISGLSKEIQGKLSQTRPQT 596
             E  EI  KYAGY+ RQQ ++ ++       LPVD+DY+ I+ +  E + KL++ RP T
Sbjct: 538 EKEGAEIAIKYAGYLQRQQAQVDQVVRQSQRPLPVDLDYSAITSMRLEAREKLARFRPLT 597

Query: 597 LGQASRIPGVTPAAISLLLIHLKKRGAGRELEQSA 631
           LGQASRI GV PA I+ LLI L+ +   R   ++A
Sbjct: 598 LGQASRIGGVNPADINALLIWLEVQERQRSQVETA 632