Pairwise Alignments

Query, 631 a.a., tRNA uridine 5-carboxymethylaminomethyl modification enzyme from Pseudomonas putida KT2440

Subject, 472 a.a., tRNA (uracil-5-)-methyltransferase Gid from Sinorhizobium meliloti 1021

 Score = 59.3 bits (142), Expect = 4e-13
 Identities = 42/108 (38%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 312 GISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFD-PRDLKYSLETKVIGGLFFAG 370
           G  T L +  Q E+ R I G++NA   R G      Y + P  L +SL  K   GL FAG
Sbjct: 294 GFQTKLKYGAQGEVFRMIPGLQNAEFARLGGLHRNTYINSPTLLDHSLTLKSRPGLRFAG 353

Query: 371 QINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDL 418
           QI G  GY E+ + GLLAG  AA   +G     P    A+ G L+D +
Sbjct: 354 QITGCEGYVESASIGLLAGRFAAAERKGVSPVLPPVTTAF-GALLDHI 400



 Score = 31.6 bits (70), Expect = 8e-05
 Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 6   SRFDVIVIGGGHAGTEAALASARMGVKTLLL---------THNVETLGHMSCNPAI---- 52
           S   + VIGGG AG+EAA   A  GV  +L           H  E+L  + C+ +     
Sbjct: 7   SHSPIHVIGGGLAGSEAAWQIAEAGVPVILHEMRGVRGTDAHKTESLAELVCSNSFRSDD 66

Query: 53  ---GGIGKSHLVKEIDALGGAMALATDKSGIQF--RVLNNRKGPAVRATRAQADRAIYKA 107
                +G  H   E+   G  +    D + +     +  +R+G A   + A AD  +   
Sbjct: 67  ATSNAVGVLH--AEMRLAGSLIMRCADLNQVPAGGALAVDREGFAEAVSAAIADHPLITV 124

Query: 108 VVREILENQPNLW 120
           +  EI    P  W
Sbjct: 125 LREEIRGLPPKDW 137