Pairwise Alignments

Query, 631 a.a., tRNA uridine 5-carboxymethylaminomethyl modification enzyme from Pseudomonas putida KT2440

Subject, 482 a.a., Gid protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 52.0 bits (123), Expect = 6e-11
 Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 312 GISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFD-PRDLKYSLETKVIGGLFFAG 370
           G  T L    Q  + R I G+ENA   R G      + + PR L  +L  K    L FAG
Sbjct: 286 GFQTKLKHGEQARIFRMIPGLENAEFARLGGIHRNTFLNSPRLLDPTLRLKARPHLRFAG 345

Query: 371 QINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLV 415
           QI G  GY E+ A GLLAG  A+       S+ P      +G L+
Sbjct: 346 QITGCEGYVESAAIGLLAGRFASAEILDAASFAPPPPTTALGGLL 390



 Score = 31.6 bits (70), Expect = 8e-05
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 28/119 (23%)

Query: 12  VIGGGHAGTEAALASARMGVKTLLL---------THNVETLGHMSC-------NPAIGGI 55
           ++GGG AG EAA  +AR G++ +L+          H  + L  + C       +P    +
Sbjct: 9   IVGGGLAGCEAAWQAARAGLRVILIEMRPLRTTEAHLGDGLAELVCSNSLRSDDPLYNAV 68

Query: 56  GKSH-----------LVKEIDALGGAMALATDKSGIQFRVLNN-RKGPAVRATRAQADR 102
           G  H            + E   +    ALA D+ G    +     + P +   R + DR
Sbjct: 69  GLLHEEMRRAGSLILAMAEAHRVPAGGALAVDRQGFSDAITRALAEHPLIEIRRGEVDR 127