Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 342 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N1B4

 Score =  531 bits (1369), Expect = e-156
 Identities = 269/340 (79%), Positives = 295/340 (86%), Gaps = 3/340 (0%)

Query: 1   MENNQPIIVKRIKRFGDGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60
           MENNQPII+KR+K++  GHHGG+WKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF
Sbjct: 1   MENNQPIIIKRVKKYAGGHHGGSWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60

Query: 61  KDPIGFSESGTPYIIDLGGSPQLAPEKTINPEVKSEPTPDTSLQLDQDKVESMAEQVERE 120
           KDP+GFSESGTPYIIDLGGSP LAPE T+NPEVKS+P PD  + +D ++VE MAEQVE+E
Sbjct: 61  KDPVGFSESGTPYIIDLGGSPTLAPENTLNPEVKSQPQPD-KVTIDSEQVEGMAEQVEKE 119

Query: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFE 180
           RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQI+DAENRPMFD GSARL+PYFE
Sbjct: 120 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIVDAENRPMFDSGSARLKPYFE 179

Query: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDTQ 240
           DILLAMADTIKAVPNKISISGHTDAKPY+GTGDFGNWELSANRANAARRAL+AG YPD Q
Sbjct: 180 DILLAMADTIKAVPNKISISGHTDAKPYSGTGDFGNWELSANRANAARRALIAGSYPDAQ 239

Query: 241 VARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKKAQRTIEGEQTQPAAPDAAQ-PGAAAP 299
           VARVVGYASS+LFDR+NP NPVNRRIDIIVLTKKAQR IEG Q    AP   Q  G    
Sbjct: 240 VARVVGYASSALFDRENPFNPVNRRIDIIVLTKKAQRAIEGSQGAEPAPVPTQGQGGPGE 299

Query: 300 VPA-APQAQAPAAEPEPMQPRELRQKLNIFEDGVLKMDEN 338
           VPA      A  A+ EP+   ELR++LN+F+D V K  E+
Sbjct: 300 VPAPTADPNALPADKEPLPAHELRERLNLFDDPVPKPGES 339