Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 339 a.a., flagellar motor protein MotB from Pseudomonas fluorescens SBW25-INTG

 Score =  521 bits (1341), Expect = e-152
 Identities = 264/334 (79%), Positives = 288/334 (86%), Gaps = 4/334 (1%)

Query: 1   MENNQPIIVKRIKRFGDGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60
           MENNQPII+KR+KRF  GHHGGAWKIAFADFATAMMAFFLVLWL+STATPEQKIAIAGYF
Sbjct: 1   MENNQPIIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60

Query: 61  KDPIGFSESGTPYIIDLGGSPQLAPEKTINPEVKSEPTPDTSLQLDQDKVESMAEQVERE 120
           KDPIGFSESGTP++IDLGGSPQLAPE+TINPEVK+E  P   + +++D VE+MAEQVE+E
Sbjct: 61  KDPIGFSESGTPFVIDLGGSPQLAPERTINPEVKTE-APQEKIPIERDTVEAMAEQVEQE 119

Query: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFE 180
           RLELLLQELQ KVEENPQL KFKDQI FEIT DGLRIQI DA NRPMFD GSARL+PYFE
Sbjct: 120 RLELLLQELQTKVEENPQLLKFKDQISFEITPDGLRIQITDAANRPMFDSGSARLKPYFE 179

Query: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDTQ 240
           DILLAMADTIKAVPNKISISGHTDAKPYAG GDFGNWELSANRANAARRALVAG YPD Q
Sbjct: 180 DILLAMADTIKAVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQ 239

Query: 241 VARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKKAQRTIEGEQTQPAAPDAAQPGAAAPV 300
           VARVVG+ASS LFD ++P NP+NRRIDI+VLTKKAQR IEG+Q QPA P     GA   V
Sbjct: 240 VARVVGFASSQLFDHKDPFNPINRRIDIVVLTKKAQRAIEGDQ-QPAPPPTPGAGAPGEV 298

Query: 301 PAAPQAQAPAAEPEPMQPRELRQKLNIFEDGVLK 334
           P  P A  P  EP P    ELRQKLN+F++G +K
Sbjct: 299 PTDPNAIPPGQEPLP--AHELRQKLNLFDEGGVK 330