Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 340 a.a., flagellar motor protein MotB from Cupriavidus basilensis FW507-4G11

 Score =  251 bits (642), Expect = 1e-71
 Identities = 142/330 (43%), Positives = 198/330 (60%), Gaps = 29/330 (8%)

Query: 6   PIIVKRIKRFGDGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFKDPI- 64
           PI+VKRIK+   GHHGG+WKIA+ADF TAMMA FLVLWLL  A P+  + +A YF+ P+ 
Sbjct: 9   PIVVKRIKKSSAGHHGGSWKIAYADFMTAMMALFLVLWLLKAAQPKDLVQLAEYFRTPLK 68

Query: 65  ----GFSESGTPYIIDLGGSPQLAPEKTINPEVKSEPTPDTSLQLDQDKVESMAEQVERE 120
               G ++S     +  GG   +  +   + EV+  P         +D  E   E+ E E
Sbjct: 69  VAIAGGNKSSLSSSVIPGGGTDVTRQ---DAEVRKTP---------EDATEKAKERQEAE 116

Query: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFE 180
           RL  L + L+  +E NP L++F+ Q+L +IT +GLRIQI+D +NRPMF  GSA ++PY  
Sbjct: 117 RLRSLKKRLEQIIENNPVLRQFRPQLLLDITSEGLRIQILDTQNRPMFRTGSAAVEPYMR 176

Query: 181 DILLAMADTIKAVPNKISISGHTDAKPYA-GTGDFGNWELSANRANAARRALVAGGYPDT 239
            IL  +   +  +PNK+S+SGHTD+  Y+ G   + NWELS++R+NA+RR LVAGG  + 
Sbjct: 177 SILREIGPVLNEMPNKVSLSGHTDSANYSNGERTYSNWELSSDRSNASRRELVAGGMNEG 236

Query: 240 QVARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKKAQRTIEGEQTQPA----APDAAQPG 295
           +V RV+G A++   D+++ L PVNRRI I+VL ++AQ  IE E    A    A  A + G
Sbjct: 237 KVLRVIGLAATMPLDKKDDLAPVNRRISIVVLNQRAQSRIEAENASAAEVSIAAKAGEAG 296

Query: 296 -------AAAPVPAAPQAQAPAAEPEPMQP 318
                  AAA  PA   A A +A P    P
Sbjct: 297 KEVQAGLAAASAPATAVAPAASAAPAAAAP 326