Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 298 a.a., chemotaxis motB protein from Caulobacter crescentus NA1000

 Score =  183 bits (464), Expect = 5e-51
 Identities = 113/293 (38%), Positives = 170/293 (58%), Gaps = 23/293 (7%)

Query: 1   MENNQPIIVKRIKRFGD-GHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGY 59
           + + QPII+K++K+ G  GHHGGAWK+A+ADF TAMMAFFL++WLL+T +PEQK  IA Y
Sbjct: 3   VNSEQPIIIKKVKKGGGHGHHGGAWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQGIADY 62

Query: 60  FKD-PIGFSESGTPYIIDLGGS----------------PQLAPE-KTINPEVKSEPTPDT 101
           F    I  + SG+  I  LGG+                 Q+APE + +  E +S  T + 
Sbjct: 63  FAPASISSTTSGSGGI--LGGTSLGDDGAKADGKLSVVQQMAPEAQDVTKEAQSSETANL 120

Query: 102 SLQLDQDKVESMAEQVERERLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMD 161
               +Q   +++A++ E++      Q L+  +++ P+L +   QIL + T +GLRIQ++D
Sbjct: 121 DSASEQALRDALAKK-EQDSFASAAQSLRQSLQDMPELAELSKQILIDQTPEGLRIQLVD 179

Query: 162 AENRPMFDLGSARLQPYFEDILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSA 221
            E R MF   S         +L A+A  I  +PN+++ISGHT A  +    D G+W LSA
Sbjct: 180 QEGRSMFKENSREPNDRARVLLRAVAKVINQLPNRVTISGHTSANAFGKKQD-GDWALSA 238

Query: 222 NRANAARRALVAGGYPDTQVARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKK 274
            RA+A+R+ L + G  D +V +V G A+S      +P    NRRI I++L +K
Sbjct: 239 QRADASRQVLRSAGVDDDRVYQVSGKANSEPLYADDPTLAGNRRISIVLLREK 291