Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit UvrB from Pseudomonas sp. SVBP6

Subject, 985 a.a., excinuclease ABC subunit B from Sinorhizobium meliloti 1021

 Score =  790 bits (2041), Expect = 0.0
 Identities = 405/657 (61%), Positives = 496/657 (75%), Gaps = 5/657 (0%)

Query: 10  FQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTLVLAPNKTLA 69
           ++PAGDQP AI  +V+G+ +G  +Q LLGVTGSGKTF++A VI   QRP ++LAPNKTLA
Sbjct: 164 YEPAGDQPTAIADLVDGLTSGERNQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLA 223

Query: 70  AQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRLSATKAL 129
           AQLY EFK FFP+NAVEYFVSYYDYYQPEAYVP SDT+IEK++SIN+ I++MR SAT++L
Sbjct: 224 AQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSL 283

Query: 130 LERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTRNEMDFAR 189
           LER D IIV +VSCIYG+GS ETY  M   +  GD+LDQR LL  L   QY R +MDF R
Sbjct: 284 LERDDVIIVASVSCIYGIGSVETYTAMTFQMSVGDRLDQRQLLADLVAQQYKRRDMDFQR 343

Query: 190 ATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRFTFYPKSHYV 249
            +FRVRGD I+IFPA  +  A RI +F DE+++I  FDPLTG+    L     Y  SHYV
Sbjct: 344 GSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLKSVKIYANSHYV 403

Query: 250 TPRETLLEAVDGIKVELAQRLEYLHKANKLVEAQRLEQRTRFDLEMILELGYCNGIENYS 309
           TPR TL  A+  IK E++QRL  L +A +L+EAQRLEQRTR+D+EM+   G C GIENYS
Sbjct: 404 TPRPTLNAAIKAIKEEMSQRLAELERAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYS 463

Query: 310 RYLSGRPAGAPPPTLYDYLPDDALLVIDESHVSVPQVGAMYKGDRSRKETLVEYGFRLPS 369
           RYL+GR  G PPPTL++Y+PD+AL+ IDESHV++PQ+G MY+GD  RK TL EYGFRLPS
Sbjct: 464 RYLTGRRPGEPPPTLFEYIPDNALIFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPS 523

Query: 370 ALDNRPMRFDEWEAVSPQTIFVSATPGNYEAEHAGRV-VEQVVRPTGLVDPQVEVRPATT 428
            +DNRP+RF+EW+A+ P TI VSATPG +E E AG V  EQV+RPTGL+DP VEVR A T
Sbjct: 524 CMDNRPLRFEEWDAMRPDTIAVSATPGAWEMEQAGGVFAEQVIRPTGLIDPPVEVRSAKT 583

Query: 429 QVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTDYLADHDVRVRYLHSDIDTVERVEIIR 488
           QVDD+L EIR+  A   R LVT LTKRMAEDLT+YL +  VRVRY+HSDIDT+ER+EIIR
Sbjct: 584 QVDDVLGEIRETAAAGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIR 643

Query: 489 DLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRA 548
           DLRLG FDVLVGINLLREGLD+PE   VAILDADKEGFLRSE SLIQTIGRAARN++G+ 
Sbjct: 644 DLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKV 703

Query: 549 ILYADNMTGSMQRAIGETERRRDKQIAFNAANGIVPKGVVKDITDIMEGANVPGSRSKKR 608
           ILYAD +TGSMQRA+ ET RRR+KQ+A+NA +GI P+ V   I+DI++       R   R
Sbjct: 704 ILYADTITGSMQRAMEETSRRREKQMAYNAEHGITPESVKAKISDILDSVY---ERDHVR 760

Query: 609 KGMAKAAEESARYEAELRSPGEIAKRIKQLEEKMYQLARDLEFEAAAQLRDEITALR 665
             ++  A +       L     +   +  LE++M   A DL+FE AA+LRDEI  L+
Sbjct: 761 ADISGVAGKGFADGGHLVG-NNLQAHLNALEKQMRDAAADLDFEKAARLRDEIKRLK 816