Pairwise Alignments

Query, 659 a.a., Exo regulatory protein AepA precursor from Pseudomonas sp. S08-1

Subject, 577 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.1 bits (157), Expect = 9e-15
 Identities = 113/553 (20%), Positives = 205/553 (37%), Gaps = 48/553 (8%)

Query: 58  RLHTVDREKPTASAVAIKDGRFLAVGSDAEVMA-LRGSATQIIDLHKRTVI-PGLNDSHL 115
           ++ T+D  +PTA+A+A++DG  L VGS  ++   L+GS   I D  K  VI PG  D H+
Sbjct: 35  KIVTMDPTQPTATAIAVRDGMILGVGSLQDLAPWLKGSMYTINDQFKENVILPGFIDPHM 94

Query: 116 HLIRGGLNYN----LELRWEGVPSLADAL-------RMLKEQADRTPTPQWVRVVGGWNE 164
           H + G + +         W  +     A          LK+  D       + +  G++ 
Sbjct: 95  HPMLGAIAFQTVWITPEPWNVMGHKTPATIGEKAYRATLKKAFDSRDPNAPIFMTWGFSS 154

Query: 165 FQFAEKRMPTLDELNKAAPDTPVFVL-HLYDRALLNRAALRVVGYTRDTPNPPGGEIVRD 223
               E     LD+++K   D P+ VL      A +N   L ++      PN     +  D
Sbjct: 155 DTHGELSGRLLDDISK---DVPILVLQRSLHEAYINTPLLTLLKTKGLNPNKFKDHLQID 211

Query: 224 -------ANGEPTGMLVARPNAMILYSTLSKGPKLPLEYQVNSTRQFMRELNRLGVTSAI 276
                   +G  + +L    + ++  +    G     +Y           L   GVT+  
Sbjct: 212 WSKNHFWEDGLFSVVLPFMSSFLLDPNAADPGYLKTRDY-----------LTYNGVTTVA 260

Query: 277 DAGGGYQNYPDDYQVIEQLAKDQQLTVRIAYNLFTQKPKEELTD---FKNWTGSVKLHQG 333
           D   G  N+  +   +++     +  +R+       K    L            +K H  
Sbjct: 261 DMNTGGTNWELEISALKRNLDTPESPIRVRLTPDVMKLAAALKSPEAAMTLVNQMKQHNT 320

Query: 334 DDFLRHNGA---GEMLVFSAA---DFEDFLEPRPDLAPNMESDLEPVVRHLVEQRWPFRL 387
           D+ + + G     +  +FS A   +   +++          S      R      +   +
Sbjct: 321 DNLVFNGGIKLFADGAMFSQAMQINAPGYIDGHKGEWITQPSSFVEFARSYWNAGYQIHV 380

Query: 388 HATYDESISRMLDVFEKVNRDIPFNGLPWFFDHAETITPKNIERVRALGGGIAIQHRMAF 447
           H   D     +LD  +++  D P     +  +H          R+  L   ++      F
Sbjct: 381 HTNGDGGAKMVLDTLQELENDKPRADHRFTVEHYGYADDGTSRRIAKLDAQVSANPFYLF 440

Query: 448 Q--GEYFVDRYGAKAAEKTPPIQRMLAEGVPVGAGTDATRVASYNPWTSLYWMVSGKTVG 505
                Y  +  G   A +  P+  + +  VPV   +D   +A   P    +  +S +T+ 
Sbjct: 441 DLGDRYAENGLGFDRAARIAPLGGLASRNVPVALHSDFP-MAPAEPLFLAWTAMSRETLS 499

Query: 506 GLELYP-QGLSRATALELFTHGSAWFSSEQGKKGQIKVGQLADLTALSADFFSVEEEAIK 564
           G    P + L+   A+   T  +A+    + + G I+ G+LAD   L  D + V  + ++
Sbjct: 500 GKVFSPSERLTLDQAIRAITIDAAYMIGMENEVGSIEAGKLADFAVLDKDPYEVGMKGLR 559

Query: 565 WIESVLTVVDGKV 577
            I+   TV  GKV
Sbjct: 560 DIKVWGTVFRGKV 572