Pairwise Alignments

Query, 251 a.a., Spermidine synthase-like protein from Pseudomonas sp. S08-1

Subject, 247 a.a., hypothetical spermidine synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  125 bits (315), Expect = 6e-34
 Identities = 87/247 (35%), Positives = 125/247 (50%), Gaps = 7/247 (2%)

Query: 6   EEILLEEVRDAWGVIRVLEIGDYRFLEFGEAIEQSCTYTRDPAWLEYDYTRAMLIGALCH 65
           + ILL E  D +G IRVL+ GD R L FG+  EQS      P   ++ Y + M++  L  
Sbjct: 3   DAILLHETHDTFGPIRVLDYGDSRVLSFGDNDEQSKILKTAPHIPQHTYVQGMML-VLLF 61

Query: 66  EAPESALFLGLGGGTLTQACLKFLELDDVEVIELRPDVPRLAMQYLGLADDPRLTMRIGD 125
             P+SA+ LGLGGG L     +F     +  +ELRP V  LA  Y  L    +L +   D
Sbjct: 62  CKPKSAIVLGLGGGALIHVLRRFDAAIKLTAVELRPTVIELAKHYFQLPIGKKLNVINDD 121

Query: 126 ALELLDSAE--TADLIFVDLYTDTGPAAGHLAWRFLENCQKRLNPGGWLVINQWGT-DDG 182
           AL  + SAE    D+IF D+Y+  G   G L+  FLE C +R+ P G+LV+N W      
Sbjct: 122 ALVFMASAEHKKVDVIFADIYSAKGVNTGQLSATFLEQCTQRIKPNGYLVLNCWKEHSQN 181

Query: 183 RPLGAALLRGLYHRHYWEIPVKEGNVTLLVPADLDQQLDFDGLKARAEALAPRLGYSLQP 242
           R L A L +   H  +    +  G   ++  + + Q L    LK +A+AL+ +L +SL+ 
Sbjct: 182 RELLADLQQ---HFAHVNACLTSGGNWVIFASQIPQSLGASALKNQAQALSQQLDFSLER 238

Query: 243 LLDELRP 249
            L    P
Sbjct: 239 SLTRFGP 245