Pairwise Alignments

Query, 241 a.a., Two-component transcriptional response regulator, OmpR family from Pseudomonas sp. S08-1

Subject, 246 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  227 bits (578), Expect = 2e-64
 Identities = 127/250 (50%), Positives = 159/250 (63%), Gaps = 19/250 (7%)

Query: 1   MEQEAWQILIVEDDQRLAELTQEYLQGNGLQVAIESDGARAAARILKEQPDLVVLDLMLP 60
           M+   W ILIV+DD  LA L  ++L+ NG +  IE +GA+A  RI+ EQP LV+LD+MLP
Sbjct: 1   MKDNNW-ILIVDDDADLANLVADFLEMNGYKTEIEHNGAKAVERIIAEQPMLVILDVMLP 59

Query: 61  GEDGLSICRKVR-------GQFAGPILMLTARTDDMDEVLGLEMGADDYVCKPVRPRVLL 113
             DGLSICR VR       G + GPILMLTA  +D+DEV GLE GADDY+ KPVR RVLL
Sbjct: 60  DMDGLSICRAVRHGHPGIEGSYNGPILMLTALNNDIDEVAGLETGADDYLAKPVRSRVLL 119

Query: 114 ARIRALLRRSEGVAEAPAAE--------NQRRLEFGPLVIDSAMREAWLRGEGIELTSAE 165
           AR+RALLRR     E P  E        N+  +EF  L ID   +     G+ IELT+AE
Sbjct: 120 ARVRALLRRKP---EPPVTEKLSKLHSNNESLIEFDGLSIDKKYQRIQQHGQDIELTTAE 176

Query: 166 FDLLWLLVANAGRILSREEIFTALRGIEYDGQDRSIDVRISRIRPKIGDDPMHPRLIKTV 225
           F+LLWLL +  G I  R+ I      + Y+   R+ID+R+SRIR K+GDDP H   IKT+
Sbjct: 177 FELLWLLASRPGEICDRDSISDYFSDLGYESSHRTIDLRVSRIRRKLGDDPSHATRIKTI 236

Query: 226 RSKGYLFVAE 235
             KGYLFV +
Sbjct: 237 HGKGYLFVGD 246