Pairwise Alignments

Query, 241 a.a., Two-component transcriptional response regulator, OmpR family from Pseudomonas sp. S08-1

Subject, 244 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  233 bits (594), Expect = 3e-66
 Identities = 120/229 (52%), Positives = 161/229 (70%), Gaps = 4/229 (1%)

Query: 7   QILIVEDDQRLAELTQEYLQGNGLQVAIESDGARAAARILKEQPDLVVLDLMLPGEDGLS 66
           ++++VEDD+++++L   YL    ++     DGA A A IL EQPDLV+LDLMLP  DG S
Sbjct: 18  KVVLVEDDEKISQLLSSYLTMQQIETVCVHDGADAVATILAEQPDLVILDLMLPNLDGFS 77

Query: 67  ICRKVRGQFAGPILMLTARTDDMDEVLGLEMGADDYVCKPVRPRVLLARIRALLRRSEGV 126
           ICR+++  F G IL LTA  DDMD+V  LEMGADD++ KP++PRVLLARIR L+RR    
Sbjct: 78  ICRQLQPVFDGKILFLTASEDDMDQVAALEMGADDFIIKPIQPRVLLARIRMLMRR---- 133

Query: 127 AEAPAAENQRRLEFGPLVIDSAMREAWLRGEGIELTSAEFDLLWLLVANAGRILSREEIF 186
           A+  A + Q  L FG L ++   ++  L GE I LT++EFDLLWLL A+A  IL+RE + 
Sbjct: 134 AKVSAPQEQHHLSFGELELNQQRKQCLLAGEEISLTTSEFDLLWLLAAHADEILTREYLV 193

Query: 187 TALRGIEYDGQDRSIDVRISRIRPKIGDDPMHPRLIKTVRSKGYLFVAE 235
             +RGIEYDG DR+ID +I  +R K+GD+P  PR I TVR++GYLFV +
Sbjct: 194 KQIRGIEYDGIDRTIDNKIVVLRKKLGDNPALPRRIITVRARGYLFVPD 242