Pairwise Alignments

Query, 555 a.a., Energy-dependent translational throttle protein EttA from Pseudomonas sp. S08-1

Subject, 554 a.a., putative ABC transporter ATP-binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  810 bits (2093), Expect = 0.0
 Identities = 389/554 (70%), Positives = 463/554 (83%)

Query: 1   MAQYVYTMHRLGKVVPPKREILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDTEFD 60
           MAQ+VY+M R+GK+VPPK++ILK+ISLSFFPGAKIGVLGLNG+GKSTLLRIMAG+DTE +
Sbjct: 1   MAQFVYSMLRVGKIVPPKKQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIE 60

Query: 61  GEARAMPGINVGYLPQEPQLDPSKSVREIVEEAVGQIKQAQARLDEVYAAYAEPDADFDA 120
           GEAR M  + +GYLPQEP+LDP ++VRE +EEAV + K A  RLDEVYA YAEPDADFDA
Sbjct: 61  GEARPMQDLKIGYLPQEPKLDPQQTVREAIEEAVSEAKNALTRLDEVYALYAEPDADFDA 120

Query: 121 LAAEQAKLEAILQASDGHNLERQLEVAADALRLPAWDARIEHLSGGEKRRVALCRLLLSA 180
           LA EQ +LEAI+QA D HNL+  LE AA+ALRLP WD +IE LSGGE+RRVA+CRLLL  
Sbjct: 121 LAKEQGELEAIIQAQDAHNLDNILERAANALRLPDWDEKIEVLSGGERRRVAICRLLLEK 180

Query: 181 PDMLLLDEPTNHLDADSVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPY 240
           PDMLLLDEPTNHLDA+SVAWLE FL ++ GTVVAITHDRYFLDN AGWILELDRG GIP+
Sbjct: 181 PDMLLLDEPTNHLDAESVAWLERFLQEYTGTVVAITHDRYFLDNAAGWILELDRGEGIPW 240

Query: 241 EGNYSGWLEAKSERLAQESKQQSAHEKAMKDELEWVRKGAKARQSKSKARLQRFEEMQSQ 300
           EGNYS WLE K  RL QES  +SA +K +  ELEWVR+GAK RQSK KAR+ RFEE+ + 
Sbjct: 241 EGNYSSWLEQKEARLKQESAAESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTN 300

Query: 301 EFQKRAETNEIYIPAGPRLGDKVIDFKNVTKGYGDRVLIDNLSFSIPKGAIVGVIGGNGA 360
           ++QKR ETNE++IP GPRLGDKVI+  N+TK YGDRVLIDNLSFS+PKGAIVG+IG NGA
Sbjct: 301 DYQKRNETNELFIPPGPRLGDKVIEVNNLTKSYGDRVLIDNLSFSVPKGAIVGIIGANGA 360

Query: 361 GKSTLFRMLMGKETPDSGSIELGDTVQLACVDQSRDDLDGSKTVWEAVSDGFDMIKIGNY 420
           GKSTLF+M+ G E PDSGSIE+GDTVQ+A V+Q RD ++   TVWE +S G D+++I N 
Sbjct: 361 GKSTLFKMISGAEQPDSGSIEVGDTVQIASVEQFRDAMNDKATVWEEISGGQDIMRINNT 420

Query: 421 EVPSRGYVGRFNFKGGDQQKFVKDLSGGERGRLHLALTLKQGANVLLLDEPSNDLDVETL 480
           E+PSR YVGRFNF+GGDQQK +  LSGGER R+HLA  L+ G NVLLLDEP+NDLDVETL
Sbjct: 421 EIPSRAYVGRFNFRGGDQQKIIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL 480

Query: 481 RSLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSHIEFFEGNYTEYEADRKKRLGD 540
           R+LEEALL+FPG A+VISHDRWFLDR+ATHIL Y D+  + F+EGNYTEY    K+ LG 
Sbjct: 481 RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSTWLKETLGT 540

Query: 541 AAAQPHRVRYKKLA 554
              +PHR++YK+++
Sbjct: 541 DVIEPHRLKYKRMS 554