Pairwise Alignments

Query, 770 a.a., UPF0313 [4Fe-4S] protein YgiQ from Pseudomonas sp. S08-1

Subject, 780 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  959 bits (2478), Expect = 0.0
 Identities = 477/785 (60%), Positives = 582/785 (74%), Gaps = 35/785 (4%)

Query: 1   MQLAKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAII 60
           MQ+   LF YPKY      PAPFLPMSR+EM +LGWDSCDIIIVTGDAYVDHPSFGMA+I
Sbjct: 1   MQVESTLFTYPKYLGRNEKPAPFLPMSRKEMAKLGWDSCDIIIVTGDAYVDHPSFGMAVI 60

Query: 61  GRLLESQGFRVGIIAQPNWRSKDDFMKLGQPNLFFGVAAGNMDSMINRYTADKKIRSDDA 120
           GR+LE+QGFRVGII+QP+W SK+DFMKLG+PNL+FGV AGNMDSMINRYTA++++R DDA
Sbjct: 61  GRMLEAQGFRVGIISQPDWSSKEDFMKLGKPNLYFGVTAGNMDSMINRYTAERRLRHDDA 120

Query: 121 YTPGGLAGARPDRASLVYSQRCKEAYSQTPVILGGIEASLRRIAHYDYWQDKVRRSILMD 180
           YT G + G RPDRA  VY+QRCKEAY Q PV++GGIEASLRRIAHYDYW DKVRRS+++D
Sbjct: 121 YTAGNVGGKRPDRAVTVYTQRCKEAYKQVPVVIGGIEASLRRIAHYDYWSDKVRRSVILD 180

Query: 181 ATADILLYGNAERAVVEIAQRLAFGEAVENITDVRGTAFIRRDTPEGWYEVDSTRIDRPG 240
           A ADIL+YGNAER +VE++ RLA GE+V +I DVRGT  IR++   GW  +DS ++D+  
Sbjct: 181 AKADILVYGNAERPLVELSHRLAAGESVGDIHDVRGTTVIRKEPLYGWKGMDSRKLDQLH 240

Query: 241 KIDKIINPYVNTQDTAACAIEQEKGPQE----DPNEAKVVELLPSPKMTRAKTVIRLPSF 296
           KID + NPY    D   C  +   GP +    D +  K + + P       KT + LPS+
Sbjct: 241 KIDPVPNPY--GADDVGC--QNLSGPSDVKVFDNDAPKPISVQPPRPKPWEKTYVLLPSY 296

Query: 297 EKVRNDPVLYAHANRVLHLETNPGNARALVQKHGEVDVWFNPPPIPMTTEEMDYVFGMPY 356
           EKV  D  LYAHA+R+LH E NPG ARAL Q HGE  +W NPP  P+ T+EMD VF + Y
Sbjct: 297 EKVAGDKYLYAHASRILHQEQNPGCARALFQPHGERAIWVNPPAWPLNTDEMDGVFDLAY 356

Query: 357 ARVPHPAYGKAKIPAYEMIRFSVNIMRGCFGGCTFCSITEHEGRIIQNRSHESIIREIEE 416
            RVPHP YGK KIPAY+MI+ S+NIMRGCFGGC+FCSITEHEGRIIQ+RS +SII+EI++
Sbjct: 357 KRVPHPVYGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRSQDSIIKEIKD 416

Query: 417 MRDKVPGFTGVVSDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIEL 476
           ++DKVPGFTGV+SDLGGPTANMYR+ C S + ES CR+ SCVFP IC +L+T+H + I+L
Sbjct: 417 IQDKVPGFTGVISDLGGPTANMYRLGCTSVKAESTCRRLSCVFPSICGHLDTNHQATIDL 476

Query: 477 YRKARALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMK 536
           YR AR +PG+KK+LIASG+RYDLA E P YVKEL +HHVGGYLKIAPEHTEEGPLN+MMK
Sbjct: 477 YRAARDVPGIKKVLIASGVRYDLATEDPRYVKELASHHVGGYLKIAPEHTEEGPLNKMMK 536

Query: 537 PGIGSYDKFKRMFEKYSKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKRNDFRADQVQ 596
           PG+G+YDKFK +F+KYS EAGK+QYLIPYFI+AHPGTTDEDM+NLALWLK   F+ DQVQ
Sbjct: 537 PGMGTYDKFKELFDKYSAEAGKKQYLIPYFISAHPGTTDEDMVNLALWLKGEKFKLDQVQ 596

Query: 597 AFYPSPMASATAMYHSGKNPLRKVTYKSDGVTIVKSEQQRRLHKAFLRYHDPKGWPMLRE 656
            FYPSPMA+AT +YH+  N L+ V + S+ V + K  +QR+LHKA LRYHDP GWPM+RE
Sbjct: 597 NFYPSPMANATTIYHTELNSLKNVKHSSETVEVPKGGRQRKLHKALLRYHDPAGWPMIRE 656

Query: 657 ALERMGRSDLIGNGKHHLIPTYQPQTDEYQSARRKNSTPAGSKKVA-------------G 703
           AL +MG+  LIG G + L+P    Q  +   A+  N TPAG K V              G
Sbjct: 657 ALIKMGKEHLIGGGANCLVPAETRQERQGYRAKTAN-TPAGKKAVTRFSANQFDERKGNG 715

Query: 704 NGGDKGKTVGRILTQHTGLPPRGSDGSKAWDKREQAKAAAEARRKAEKSGAGKPASK-KP 762
            G  +GK+ G           +G    +A  K    K +   +  A KS AGK  S+ KP
Sbjct: 716 QGNAQGKSQG-----------KGKSQGQAAGKGVSGKGST-GKGSAGKSSAGKAGSRGKP 763

Query: 763 GKRPV 767
           GKRPV
Sbjct: 764 GKRPV 768