Pairwise Alignments

Query, 168 a.a., peptide deformylase from Pseudomonas sp. S08-1

Subject, 170 a.a., peptide deformylase (RefSeq) from Shewanella loihica PV-4

 Score =  197 bits (502), Expect = 6e-56
 Identities = 100/168 (59%), Positives = 123/168 (73%), Gaps = 1/168 (0%)

Query: 1   MAILNILEFPDPRLRTIAKPVTVFDAALSQLIDDMFETMYAAPGIGLAATQINVHKRVVV 60
           M++L +L FPD RLRTIAKP+T F+A L   ID+MFETMY   GIGLAATQ++ H +++V
Sbjct: 1   MSLLKVLRFPDERLRTIAKPITEFNAELQTQIDNMFETMYEEKGIGLAATQVDYHHQLIV 60

Query: 61  MDLSEDKSEPRVFINPEFESLTEEMDQYQEGCLSVPGFYENVDRPQKVKIKAQDRDGKPY 120
           MDL +D   P+VFIN E    + +    +EGCLSVPG Y  VDR + V IKA DRDG  +
Sbjct: 61  MDLQDDVERPKVFINLEIIEKSGDFCN-EEGCLSVPGIYAKVDRAEFVTIKALDRDGNEF 119

Query: 121 ELIAEGLLAVCIQHECDHLNGKLFVDYLSNLKRDRIKKKLEKQHRQQA 168
            L A+GL A+C+QHE DHLNGKLFVDYLS LKR RIK+KLEK  R +A
Sbjct: 120 TLEADGLFAICLQHELDHLNGKLFVDYLSPLKRQRIKQKLEKAARLEA 167