Pairwise Alignments

Query, 168 a.a., peptide deformylase from Pseudomonas sp. S08-1

Subject, 163 a.a., peptide deformylase (RefSeq) from Shewanella loihica PV-4

 Score =  146 bits (369), Expect = 1e-40
 Identities = 78/163 (47%), Positives = 113/163 (69%), Gaps = 3/163 (1%)

Query: 1   MAILNILEFPDPRLRTIAKPVTVFDAALSQLIDDMFETMYAAP-GIGLAATQINVHKRVV 59
           M +L+IL  PD RL+  AKPV    AA+   IDD+ ETMY    GIGLAATQ+     ++
Sbjct: 1   MPVLDILTIPDERLKRKAKPVEDI-AAVQGFIDDLIETMYHTDDGIGLAATQVGSEHAIL 59

Query: 60  VMDLSEDKSEPRVFINPEFESLTEEMDQYQEGCLSVPGFYENVDRPQKVKIKAQDRDGKP 119
           V+DLSED+ +P V INPEF   + E+   +EGCLS+PG+   V R +KVK+KA +R+G+ 
Sbjct: 60  VIDLSEDRDQPMVVINPEFVERSGEIVG-EEGCLSIPGYRAKVTRFEKVKVKALNREGEA 118

Query: 120 YELIAEGLLAVCIQHECDHLNGKLFVDYLSNLKRDRIKKKLEK 162
           +E+ ++  LA+ +QHE DHL+GK+F+++LS LK+    KK++K
Sbjct: 119 FEIESDDFLAIVLQHEMDHLDGKVFIEHLSPLKQQIALKKVKK 161