Pairwise Alignments

Query, 579 a.a., arginine--tRNA ligase from Pseudomonas sp. S08-1

Subject, 597 a.a., arginine--tRNA ligase from Rhodopseudomonas palustris CGA009

 Score =  130 bits (327), Expect = 2e-34
 Identities = 163/628 (25%), Positives = 255/628 (40%), Gaps = 95/628 (15%)

Query: 7   HLIQQALTRLTA-------EGVLPEGLSPD-IQVENTKDRSNGDFASNIAMMLAKPAGMK 58
           HL  + L+R+ A       EG LP G+    + VE  KD S+GD A+N AM+LAK A  K
Sbjct: 9   HLFARLLSRVHAVCAALIEEGALPAGIDLSRVVVEPPKDASHGDMATNAAMVLAKDAKAK 68

Query: 59  PRDLAEKLVAALPADDGIAKVEIAGPGFLNFFQNSDALAQRLEAAL-ANAKLGVRKAGNP 117
           PRDLA+K+   L A++ I +V IAGPGF+N        A+ L A L A A  G    G  
Sbjct: 69  PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 128

Query: 118 QRVVVDLSAPNLAKEMHVGHLRSTIIGDGVARVLEFLGDSVIRQNHVGDWGTQFGMLL-- 175
           ++V V+  + N    MHVGH R  + GD +A +L+  G  V R+ ++ D G Q  +L   
Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYDVTREYYINDAGAQVDVLARS 188

Query: 176 AYMQENPIAAESELSDLEGFY----------------RAAKKRFDESAEFAD-RARELVV 218
           A+++      E+     EG Y                 AA K   E+      RA  + +
Sbjct: 189 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEHGAALKDMPEAQWLPTVRATAIAM 248

Query: 219 QLQA--GDAECLRLWNRFNDISLSHCQAIYDRLGVKLSMADVKGESAYNDDLANVVADLQ 276
            ++A  GD   L + +       S  +   +R+   +     KG+  Y   L        
Sbjct: 249 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGD-VYQGRLP------P 301

Query: 277 AKGLLTED--NGAQCVFMDEFKNSEGNPLPLIVQKAGGGYLYATTDLAATRYRANVLKAD 334
            KG   ED  +  Q +F      + G+ +   + K+ G Y Y  +D+A  + + +   A+
Sbjct: 302 PKGAPVEDYEDREQTLFR---ATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFAN 358

Query: 335 RV-LYFVDQRQALHFQMVFAAARLAGFVPASMELEHMGFGTMNGPDGKPFKTRDGGTVKL 393
            V ++  D    +        A  AG     +++  +     NG   K  K R G  V L
Sbjct: 359 MVDVWGADHGGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSK-RAGDFVTL 417

Query: 394 VELLDEAEQRAYALVKDKNPELAEDELRQIGRVVGIASVKYADLSKHRTSDYRFNFELML 453
            E++DE                           VG  +V++  L   R +D   +F+L  
Sbjct: 418 REVVDE---------------------------VGSDAVRFMML--FRKNDAVLDFDLAK 448

Query: 454 SFE---GNTAPYLLYAYTRVASILRKLGKDVTEIGGQI-------------RIEAPQEQA 497
             E    N   Y+ Y + R  SI R   + V ++                 R+  P E  
Sbjct: 449 VIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSKARAAMLRQAPLERLNDPAELE 508

Query: 498 LAGKLAQFADTLNNVAGKGEPHLLCAYLYDLAGLFSSFY------ENCPILAAEDEATQQ 551
           L  +LA +   +   A   EPH +  YL +LA  F + +       +   +   D    +
Sbjct: 509 LLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALWTHGRDLPHLRFIINNDAEITR 568

Query: 552 SRLRLAALTGRTLKQGLELLGLETLERM 579
           +RL +       L  GL +LG+   + M
Sbjct: 569 ARLAMVQGVVSVLASGLAILGVTAPDEM 596