Pairwise Alignments

Query, 712 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Pseudomonas sp. S08-1

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  268 bits (684), Expect = 7e-76
 Identities = 153/385 (39%), Positives = 224/385 (58%)

Query: 328 WTLAITLPTSAVFADLQQLQAGLAEQANQDTFGMALVGLLIAALGLLVIWFVGYGIARPL 387
           W L     T  + A ++  +  + +  N     + L  L++ A+  +V+      +  P+
Sbjct: 170 WILGTGAYTDDIDAQVESYREVMTKHMNDKAMMILLFALVLVAITAVVMLVAAQRMVNPI 229

Query: 388 KDMAAMLDDIAKGDGDLTVRLQVDRADELGQIASGFNTFLNKLQNMIRDVVTSVQKVSDS 447
            +M   L+DIAKG+GDLT RL V  +DE+  +   FN F++KLQ +I+DV  +  +V   
Sbjct: 230 HNMVQNLEDIAKGEGDLTKRLDVQGSDEIAMLGRAFNQFVDKLQGIIKDVARATVEVKSG 289

Query: 448 SEHTADIAIRTNQGVQRQMAEIDQVATAVHEMTATAQDVARNATQAAEAASHADRSANDG 507
           +++ +       Q +     E DQV TA+ EM+ATA +VA + TQ AEA   A +   + 
Sbjct: 290 ADNISSQTAAMAQQLISHNNETDQVVTAITEMSATASEVAMSTTQVAEATQAATQDVGNA 349

Query: 508 KRIVEGTAKAISALAGEIGRAVSVVQTLAKDSENINAILVAIRGIAEQTNLLALNAAIEA 567
           +  V+ +   +S L  EI  A   + +L + S+ IN++L  I GIAEQTNLLALNAAIEA
Sbjct: 350 QECVDSSLHEVSTLMAEIDMAAGHINSLNEQSQKINSVLSVIGGIAEQTNLLALNAAIEA 409

Query: 568 ARAGEQGRGFAVVADEVRNLAQKTQQATEEIQSMIQQLQHGTREVVTVMEQSQARTDDSV 627
           ARAGEQGRGFAVVADEVR+LA +TQ +T EI  M+ +L +     V+ ME SQ     SV
Sbjct: 410 ARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSELHNLVSLAVSSMESSQQSCHRSV 469

Query: 628 QQAQIAASALENITQAVSVINDMNTQIASAAEEQSAVAEDINRNVTNIGQVAAEVAGGAD 687
             ++  + +L  +T AV+ INDM+TQIA+AA EQS+V E+INRNV  I ++  E+   ++
Sbjct: 470 TSSRAISDSLGAVTSAVTSINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLQASN 529

Query: 688 EASGASAELTKLAEQQRRLINQFRV 712
            AS  S  L         L+ QF+V
Sbjct: 530 SASDTSQGLANEGRNLDTLVGQFKV 554