Pairwise Alignments

Query, 312 a.a., Efflux ABC transporter, ATP-binding protein from Pseudomonas sp. S08-1

Subject, 1171 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  201 bits (512), Expect = 5e-56
 Identities = 103/218 (47%), Positives = 140/218 (64%)

Query: 7   VIRARGLSKRFGKLTAVDHLDLSVPRAEVFGFLGPNGCGKSTTIRMLCGLLQPSEGEVEV 66
           ++  RGL +RFG   AV  +   V + EVFG LGPNG GKSTT RMLCGLL P+ G + V
Sbjct: 436 LVEVRGLERRFGAFRAVHDVSFDVRQGEVFGLLGPNGAGKSTTFRMLCGLLPPTAGTLRV 495

Query: 67  LGCQIPRDAEELKRRIGYMTQKFSLYEDLTVQENLEFLASVQGIGRRETRQRIDELLERY 126
            G  +   A E +R++GY+ Q+FS Y  L+V+ENL+F A   G+      +RI   LE  
Sbjct: 496 GGVDLRTAAAEARRQVGYVAQRFSQYGGLSVRENLDFYAGAYGLRGARRNERILWALEEM 555

Query: 127 WLTDRRKQLAGTMSGGQKQRLALAGAVLHKPDLLLLDEPTSAVDPQSRREFWDSLFELAE 186
            L   R   AGT+  G +QRLALA A+LH+P +L LDE TS VDP +RR FW  +  LA 
Sbjct: 556 GLAPWRDTAAGTLPLGHRQRLALACALLHEPRILFLDEVTSGVDPLARRAFWRRITGLAR 615

Query: 187 EGTTLLVSTHYMDEAERCTRLGILDAGRLVADGSPREL 224
           +G T++V+TH+++EAE C RL +L  G L+A G+P ++
Sbjct: 616 DGVTIIVTTHFLEEAEYCDRLAVLAGGELLALGTPDDV 653



 Score =  199 bits (506), Expect = 3e-55
 Identities = 118/303 (38%), Positives = 169/303 (55%), Gaps = 14/303 (4%)

Query: 11  RGLSKRFG----KLTAVDHLDLSVPRAEVFGFLGPNGCGKSTTIRMLCGLLQPSEGEVEV 66
           RGL + FG    ++ A+D + +S+ R  V G +GP+G GK+T +R+  GLL P EGE+ V
Sbjct: 30  RGLVRGFGSGKARVRALDGVTVSLARGTVTGLVGPDGAGKTTLLRIAAGLLVPDEGEMTV 89

Query: 67  LGCQIPRDAEELKRRIGYMTQKFSLYEDLTVQENLEFLASVQGIGRRETRQRIDELLERY 126
           LG    RD   ++ RIGYM Q+F LYEDLTV ENL   A +QG+     ++R   L+   
Sbjct: 90  LGHDAVRDPLAIQSRIGYMPQRFGLYEDLTVAENLTLYADLQGVTYEARKRRWPHLMRLT 149

Query: 127 WLTDRRKQLAGTMSGGQKQRLALAGAVLHKPDLLLLDEPTSAVDPQSRREFWDSLFELA- 185
            L     +LAG +SGG KQ+L LA  ++  PD+LLLDEPT  VDP SRRE W+ +  L  
Sbjct: 150 GLAPFMDRLAGRLSGGMKQKLGLACTLVKSPDMLLLDEPTVGVDPLSRRELWNIVHGLVR 209

Query: 186 EEGTTLLVSTHYMDEAERCTRLGILDAGRLVADGSPRELMDALPGHPLLI--ECAQPRAA 243
           E+G T+LVST Y+DEAE C R+ +L  GR++ D  P + +  L G    +  +   PR  
Sbjct: 210 EDGITVLVSTAYLDEAEMCDRVLVLAGGRVLGDAQPADYLKGLAGCAFAVAPDGRPPREV 269

Query: 244 QRALHGHREVLASAQIGATLRVLCASENARDDIAATLRRAGVEAELRDGEANLEDVFVAV 303
           Q  L+G   VL +      + +LCA+    + +         +          ED F+A+
Sbjct: 270 QHGLYGVPGVLDATVRDGRVHLLCATPRTVESLPG-------DGPFMPRPLRFEDGFMAL 322

Query: 304 TRK 306
            R+
Sbjct: 323 FRR 325