Pairwise Alignments

Query, 233 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF from Pseudomonas sp. S08-1

Subject, 238 a.a., Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N1B4

 Score =  262 bits (670), Expect = 4e-75
 Identities = 137/233 (58%), Positives = 172/233 (73%)

Query: 1   MLNFNNVSTFYGKIQALHNVSIDVEQGEIVTLIGANGAGKSTLLMTLCGSPRAASGSIRY 60
           +L   ++  FYG IQAL  VS+ + +GE V+LIG+NGAGKSTLLM++ G PRAA G I Y
Sbjct: 5   ILELKDLDVFYGPIQALKKVSLHINEGETVSLIGSNGAGKSTLLMSIFGQPRAADGQIVY 64

Query: 61  MGEELVGQESCDIMRKSIAVVPEGRRVFARLTVEENLAMGGFFGSKGDNQEQLDKVLQLF 120
            G ++  + S  I    IA  PEGRRVF  +TVEENL MG         +E + ++ +LF
Sbjct: 65  QGVDITHKSSHYIASNGIAQSPEGRRVFPDMTVEENLLMGTIPIGDKYAKEDMQRMFELF 124

Query: 121 PRLKERFAQRAGTMSGGEQQMLAIGRALMSKPKLLLLDEPSLGLAPIIIQQIFDIIEQLR 180
           PRL+ER  QRA TMSGGEQQMLAI RALMS+PKLLLLDEPSLGLAPI+++QIF  + +L 
Sbjct: 125 PRLEERRTQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQIFATLRELA 184

Query: 181 KDGVTVFLVEQNANQALKLADRAYVLENGRIVMQGTGADLLVDPKVRDAYLGG 233
             G+T+FLVEQNAN ALKL+DRAYV+ NG I + GTG +LLV+ +VR+AYLGG
Sbjct: 185 STGMTIFLVEQNANHALKLSDRAYVMVNGEIRLSGTGKELLVNDEVRNAYLGG 237