Pairwise Alignments

Query, 233 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivF from Pseudomonas sp. S08-1

Subject, 238 a.a., branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  236 bits (603), Expect = 2e-67
 Identities = 123/233 (52%), Positives = 163/233 (69%), Gaps = 1/233 (0%)

Query: 2   LNFNNVSTFYGKIQALHNVSIDVEQGEIVTLIGANGAGKSTLLMTLCGSPRAASGSIRYM 61
           L   N+   YG ++ALH + I V++GEIVT++GANGAGK+T LM++ G  + + G + + 
Sbjct: 3   LELRNLHVKYGNVEALHGIDIRVDEGEIVTILGANGAGKTTTLMSISGLVKPSEGGVFFR 62

Query: 62  GEELVGQESCDIMRKSIAVVPEGRRVFARLTVEENLAMGGFF-GSKGDNQEQLDKVLQLF 120
            E L    S +++ + I   PEGRRVF  L+V ENL +G F    K   +  L  + +LF
Sbjct: 63  DEPLHKLHSHEVVARGITQSPEGRRVFGTLSVLENLYLGAFTCRDKARVERTLGWIFELF 122

Query: 121 PRLKERFAQRAGTMSGGEQQMLAIGRALMSKPKLLLLDEPSLGLAPIIIQQIFDIIEQLR 180
           PRL+ER  Q AGT+SGGEQQMLAIGRALM  PK+LLLDEPSLGLAPI+++ IFD +  + 
Sbjct: 123 PRLEERRGQLAGTLSGGEQQMLAIGRALMGDPKVLLLDEPSLGLAPILVKSIFDTVRTIN 182

Query: 181 KDGVTVFLVEQNANQALKLADRAYVLENGRIVMQGTGADLLVDPKVRDAYLGG 233
           + GVTV LVEQNA  ALKLA R YV+E GR+VM+ + A LL +P+V+ AYLGG
Sbjct: 183 QSGVTVVLVEQNARAALKLATRGYVMEVGRVVMEDSAASLLANPEVQAAYLGG 235