Pairwise Alignments

Query, 630 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas sp. S08-1

Subject, 624 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  379 bits (974), Expect = e-109
 Identities = 201/454 (44%), Positives = 283/454 (62%), Gaps = 7/454 (1%)

Query: 174 WLLANDLRKALLRLQQEILRVKDSEASFTHLAQHDALTNLPNRLLIRDRMEQAIGRARRD 233
           W LA D  + +  L++ I          +HL Q+D LT LPN +L+ DR+ QA+ + RR 
Sbjct: 160 WQLAQDAARKMRSLERTIEERVQELLKVSHLLQYDVLTELPNSMLLGDRLTQAMAQCRRH 219

Query: 234 DEQVALLFLDLDNFKTINDSLGHAAGDELLQEVARRLKDTVRDIDTVSRQGGDEFLMVLA 293
           D Q+A++F+ LD FK IN++LGH  GDE+L+ VAR L   VR+ D+V R G DEF++VL 
Sbjct: 220 DRQLAVMFIGLDRFKRINNALGHPVGDEMLKRVARALATVVRESDSVFRYGSDEFVVVLG 279

Query: 294 DVADLAAVSSVAALVQQKLAQPFALKGMQIVTSISIGISLFPGDGDDFDTLLKHADMAMY 353
           D+ D      VA  +   ++ P  + G  +  + S+GIS++P DG D   L+K A+ AM 
Sbjct: 280 DIVDPQQTKGVADKLLAAISSPQPIDGHDLTVTASLGISVYPSDGFDAVALIKKAETAMR 339

Query: 354 QAKSAGRNGFCFFDEQMNADTHERLALELDLRQALSRGEFVLHYQPIIDLHGGRLLAAEA 413
             K  G N + FF E MN    ++  +E  LR  L R EFVLHYQP +DL  G+++  EA
Sbjct: 340 NVKETGPNDYRFFTEDMNRRARQQQTIESGLRLGLQRKEFVLHYQPKLDLKSGKVVGVEA 399

Query: 414 LLRWQHPQRGTLGPDRFIRVAEESGLIVEIGEWVLNEACRQAMLWQAAGLPRFAVAVNLS 473
           L+RW  P  G + P  FI VAE+SGLIV + +WVL EAC+QA  WQA G+    ++VN+S
Sbjct: 400 LVRWNRPDHGLVYPSDFIPVAEDSGLIVPLSQWVLQEACQQACRWQAQGMRPLYLSVNVS 459

Query: 474 AVQFRRGNLEAMVHAALNRFGLAPACLELELTESILLQD----SAQLRRLKELGVKLSID 529
           A+ FR+      +   L   GLAP  LELE+TES+L+Q+     A L+ +K+LG++L+ID
Sbjct: 460 AIDFRQRGFVEGIARTLKETGLAPTQLELEITESVLMQNVDTTVAILKAIKQLGIRLAID 519

Query: 530 DFGTGYSSLSYLQRFQVDKLKIDQSFVRGLTGNAQDQAIVTAIVQMARSLGLHTTAEGIE 589
           DFGTGYSSLSYLQ+F VD LKIDQSFV  L+ ++ D  +V+ I+ + +SL LH  AEG+E
Sbjct: 520 DFGTGYSSLSYLQKFPVDVLKIDQSFVGDLSIDSNDAKLVSTIISLGKSLNLHIIAEGVE 579

Query: 590 DEATRALLAELGCDQGQGFLFARPLAATEFGAFA 623
                  L +  C++ QG+ F++   A E  AFA
Sbjct: 580 TLEQLEFLKKHHCEEVQGYYFSK---AVEPQAFA 610