Pairwise Alignments

Query, 630 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas sp. S08-1

Subject, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  390 bits (1003), Expect = e-113
 Identities = 215/460 (46%), Positives = 296/460 (64%), Gaps = 8/460 (1%)

Query: 175 LLANDLRKALLRLQQEILRVKDSEASFT----HLAQHDALTNLPNRLLIRDRMEQAIGRA 230
           LLA  L +   +L Q  LR  +++ ++     +LA HD LT LPNR L    + Q+IG A
Sbjct: 323 LLAGLLARMSWQLVQSRLRAGEAKIAYAENVEYLAYHDGLTALPNRSLFSKLLSQSIGEA 382

Query: 231 RRDDEQVALLFLDLDNFKTINDSLGHAAGDELLQEVARRLKDTVRDIDTVSRQGGDEFLM 290
            R   Q+A+LFLDLD FK +ND+LGH AGD+LL+EVA RLK  +R  DTV+R GGDEF++
Sbjct: 383 SRYHRQLAVLFLDLDRFKQVNDTLGHDAGDQLLKEVALRLKACLRTSDTVARLGGDEFVI 442

Query: 291 VLADVADLAAVSSVAALVQQKLAQPFALKGMQIVTSISIGISLFPGDGDDFDTLLKHADM 350
           +L +++D   V++ A  V   +A+PF L+G +   + S+GIS+FP DG D  TL K+AD+
Sbjct: 443 LLPELSDDKDVATAAQKVLGAIARPFNLQGQEFRVTASVGISVFPQDGLDEQTLKKNADI 502

Query: 351 AMYQAKSAGRNGFCFFDEQMNADTHERLALELDLRQALSRGEFVLHYQPIIDLHGGRLLA 410
           AMYQAK  G+N F F+  ++NAD+ ER+ LEL LR AL R EF LHYQ   D+  GR+  
Sbjct: 503 AMYQAKQCGKNNFQFYSAKLNADSLERMTLELSLRHALERHEFQLHYQAKRDIGSGRITG 562

Query: 411 AEALLRWQHPQRGTLGPDRFIRVAEESGLIVEIGEWVLNEACRQAMLWQAAGLPRFAVAV 470
            EALLRW HP  G + P +FI VAEE+GLIV IG+WVL  AC+Q + WQ  GLP   VAV
Sbjct: 563 MEALLRWNHPDLGIVAPMQFIPVAEETGLIVPIGKWVLKTACQQNVAWQQQGLPCLGVAV 622

Query: 471 NLSAVQFRRGNLEAMVHAALNRFGLAPACLELELTESILLQDSAQ----LRRLKELGVKL 526
           NL+A QF   NL   +   L   G+    LELE+ ES+L+QD  +    L  LK L V++
Sbjct: 623 NLTARQFADENLLTDLAGILAETGMDARLLELEIAESLLMQDVKKALNVLTGLKHLKVRI 682

Query: 527 SIDDFGTGYSSLSYLQRFQVDKLKIDQSFVRGLTGNAQDQAIVTAIVQMARSLGLHTTAE 586
           +IDDFG GYSSLS L++F +D +KID+S +   +  ++D+A+  AI+ M R+L L   A+
Sbjct: 683 AIDDFGIGYSSLSALEQFPLDVIKIDRSCICDTSSVSEDKALTEAIIAMGRTLSLTVVAQ 742

Query: 587 GIEDEATRALLAELGCDQGQGFLFARPLAATEFGAFARRQ 626
           G+E +     L +  CD+ QGF F +P+ A +F    + Q
Sbjct: 743 GVETKEQADFLRDNACDEFQGFYFNKPVPADQFKVLLKAQ 782