Pairwise Alignments

Query, 339 a.a., ABC transporter, permease protein 2 from Pseudomonas sp. S08-1

Subject, 347 a.a., ABC transporter permease subunit from Rahnella sp. WP5

 Score =  429 bits (1104), Expect = e-125
 Identities = 203/335 (60%), Positives = 256/335 (76%), Gaps = 1/335 (0%)

Query: 3   LSPLNQRRLALFKSHKRGWWSLWLFLILFVLSLGAELIANDKPLAVRYDGEWYFPLVKRY 62
           L+ ++Q R A F  ++RG+WSLW+F+++ +L L + ++ANDKPL  RY G  Y P +  Y
Sbjct: 6   LNSVSQARWARFCQNRRGYWSLWIFMVMLILVLLSNVLANDKPLLARYQGHLYVPFLVNY 65

Query: 63  AETTFGGEFPLQANYKSPYIQELIEAKDGWMLWPPIPFSYSSINYELQVPAPAPPSAQNW 122
           +ETTFGGE    A+Y+ P++   IE   GW LW PI  SYSSIN+    P P+PPS QNW
Sbjct: 66  SETTFGGELETPADYQDPFVLRQIE-DHGWALWAPIRNSYSSINFSTTRPFPSPPSTQNW 124

Query: 123 LGTDDQGRDVLARVIYGFRVSVLFALALTLASSVIGVFAGALQGYYGGWVDLAGQRFLEV 182
           LGTD  G DVLA+++YG R+S+ F + LT  +SVIG+  GA QGYYGG +DL GQRF+EV
Sbjct: 125 LGTDSNGHDVLAQILYGLRISLFFGVLLTAMTSVIGMIVGATQGYYGGLIDLLGQRFIEV 184

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
           WS +P L+L+IILAS VQPNFWWLL I +L  WM LV VVRAEFLR RN +Y+RAA+A+G
Sbjct: 185 WSSIPTLFLIIILASVVQPNFWWLLLITVLSGWMMLVSVVRAEFLRTRNFDYIRAAQAMG 244

Query: 243 MGNGGIMFHHILPNAMVSTMTYMPFILTGAIGTLTSLDFLGFGLPAGEPSLGELVAQGKA 302
           + +  IM+ H+LPNAMV+T+TY+PFIL G+I TLTSLDFLGFGLP G PSLG L+ +GK 
Sbjct: 245 VSDRAIMWRHMLPNAMVATLTYLPFILCGSITTLTSLDFLGFGLPLGSPSLGTLLMEGKN 304

Query: 303 NLQAPWLGISAFAVLAVMLSLLVFIGEAARDAFDP 337
           NLQAPWLGISAF VLA +LSLL+FIGEA RDAF+P
Sbjct: 305 NLQAPWLGISAFVVLAALLSLLIFIGEAVRDAFNP 339