Pairwise Alignments

Query, 204 a.a., Transporter, LysE family from Pseudomonas sp. S08-1

Subject, 208 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  139 bits (349), Expect = 5e-38
 Identities = 76/194 (39%), Positives = 115/194 (59%), Gaps = 1/194 (0%)

Query: 5   LLIAFILFAFVTSVTPGPNNMMLLASGVNFGVRRSVPHMLGISLGFMVLVAAVGLGLGQL 64
           L+++   F    ++TPGPNN++L +SG +FGV R++PH+ GI LG   L  +V LGLG L
Sbjct: 14  LMVSAAFFCATMTMTPGPNNILLASSGAHFGVMRTLPHIAGIRLGSTSLHLSVLLGLGAL 73

Query: 65  FEQFPPLYTALRYAGAAYLLYLAWKIAGAGAPDASGKAAGKPFTFLQAAAFQWVNPKAWI 124
           FE FP L+  L+YA   YLL+LA+++  +    A      KP + ++AA FQW+NPK+W+
Sbjct: 74  FEVFPYLHHILKYAALLYLLHLAYRLVTSPVNAAHLDEGRKPMSLMEAALFQWINPKSWM 133

Query: 125 MAIGAITTYT-PQDGFLVNVLLIAALFALVNCPSVGLWTVAGSLLRRWLDKPRVLRAFNI 183
             I   + +T   +GF ++ LL   +F LV  P+   W   G+ + + L+  +  R FN 
Sbjct: 134 STITLCSAFTLGGEGFWLSALLGVLVFNLVGFPASFTWVFVGAAISKTLNTDKRRRHFNW 193

Query: 184 GMALLLVASLYPIL 197
            M  LL+ SL  IL
Sbjct: 194 FMGSLLLVSLPMIL 207