Pairwise Alignments

Query, 295 a.a., HTH-type transcriptional regulator HdfR from Pseudomonas sp. RS175

Subject, 307 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 18/253 (7%)

Query: 1   MDIKQLKFLIALDETRHFGQAAARCHITQPTLSMRLRSLEEELGLPLVNRGQRFEGFTAP 60
           MD+ QLK LI + E     +A+ R HI QP LS ++R LE+ELG  L +R  R    T  
Sbjct: 1   MDVVQLKTLIHVAELGSLSKASDRLHIAQPALSRQIRMLEKELGTYLFDRHGRGMEITDA 60

Query: 61  GERVLAWARTVLAAYDGLQAEAAACRGNLVGTLRLGIVP-LSDFDPLSMMQRLHTEHPNL 119
           G  VLA A  ++   + +++     + +  GT+ +G  P +++   + +++++   HPNL
Sbjct: 61  GREVLAHATRIMEEMESIRSSVVGGKTSFRGTVVIGTTPTVAEIVTVPLVRKIKEAHPNL 120

Query: 120 RFELSSLSSEQIIEQLANNRIDLGISYLERLDNERFESLSFTPTRMGLLYDQRFFYFG-- 177
               SS  S  +++ +    ++L ISY    D +   +L   P  M     +     G  
Sbjct: 121 AVRFSSAFSGYLLDWVQRGELELAISY----DPQPLHTLRIVPVMM-----ENLLLVGPA 171

Query: 178 ------EQPLSWQALIELPLGMLTSGMHFRQSIDHSFHSRGLTPKPLLQTDAVYQLLQAV 231
                 + P+S+++L E  L + ++    R  +D+     G+  K  ++ D+   ++  V
Sbjct: 172 SAKLRLDVPVSFESLAEQQLVLPSARHSLRVILDNCAREVGIKLKTSVEADSFGAMIDLV 231

Query: 232 HGGLCCAVMPLNS 244
             G     +PL S
Sbjct: 232 RNGFGLTALPLAS 244