Pairwise Alignments

Query, 289 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 274 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.8 bits (177), Expect = 8e-18
 Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 13/228 (5%)

Query: 19  VPPQPQIMVDLQMEQYMPDPDLETIAKLISQDPGLSGALLKIVNSPYYGLRNKITSIQRA 78
           +P  P+ + +L       +  ++ IA  +S+DP +S  +L++ N  YYG   ++ SI  A
Sbjct: 13  LPRLPKAISELLEVVNDDNATVKNIATKVSRDPLISAKVLRLANCAYYGHSREVGSIDEA 72

Query: 79  VNLLGSRSIINLINAQSIKGELHDDTIVTLNRFWDTAQDVAMTCLTLAKRVGLENGDEAY 138
           V  LG +++  L+ A ++ G +     V L  FW    ++A+    +AKR G++  DEA+
Sbjct: 73  VVRLGMQTLRTLVLASAVMGAVPKCNGVDLAHFWGQTFEIALYSQEMAKRCGVQ-PDEAF 131

Query: 139 ALGLFHDCGVPLMLKQFPNYMSVLEQAYASASAECRVVDTENRLFNTNHAVVGYYTSKSW 198
             G+ H  G  L+    P     + +A A    +      E  L   +   +G   +++W
Sbjct: 132 TCGILHRIGDLLIAAISPEDAEKITEAVAQGKDKHAF---ERELLGYDSPDIGALLAQNW 188

Query: 199 RLPDHVSQAIANHHNALAIFSDESSRNNSQLKNLLAILKMAEHICASY 246
           +    + Q I        +F D   ++++    L A+L +A  + A +
Sbjct: 189 KFTPALVQGI--------LFQDH-PKDSNPFSKLAALLCLAHKVLADW 227