Pairwise Alignments

Query, 289 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 833 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 5/194 (2%)

Query: 23  PQIMVDLQMEQYMPDPDLETIAKLISQDPGLSGALLKIVNSPYYGLRNKITSIQRAVNLL 82
           P + V L      P P+L TI +LI+ DP L+ A+L +VNSPYYGL +++  +QRA  +L
Sbjct: 24  PPVTVQLVQALVAPYPELATIGRLIAMDPVLAAAVLNLVNSPYYGLASRVADLQRAAAVL 83

Query: 83  GSRSIINLINAQSIKGELHD---DTIVTLNRFWDTAQDVAMTCLTLAKRVGLENGDEAYA 139
           G+R ++ L  + S + +L      +   +   W      A+    +A+ +  +    AY 
Sbjct: 84  GTREVLKLALSLSFQKKLSSAIKRSTQAMFADWRMVVWSAIAAEHIAQTLCPDKAHLAYL 143

Query: 140 LGLFHDCGVPLMLKQFPNYMSVLEQAYASASAECRVVDTENRLFNTNHAVVGYYTSKSWR 199
             L  D  + L L+   +    L       S +   ++ E RL+   H        + W 
Sbjct: 144 AALLKD--LELFLRLCLDETGPLADRTCITSLDNGQLEEEGRLWGNTHPDRAADIIRQWN 201

Query: 200 LPDHVSQAIANHHN 213
           LP+ +++AIA HH+
Sbjct: 202 LPEELAEAIALHHD 215