Pairwise Alignments

Query, 289 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 280 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 6/211 (2%)

Query: 5   LSAEQIQQSLQGISVPPQPQIMVDLQMEQYMPDPDLETIAKLISQDPGLSGALLKIVNSP 64
           L  E   + L   S+P  P ++ ++      P    E IAK+I+ D  LS  +LK+VNSP
Sbjct: 6   LRTEYRGRILAAQSLPTLPAVLDEVTRLVEDPGSSTEQIAKVIAYDQVLSAKVLKMVNSP 65

Query: 65  YYGLRNKITSIQRAVNLLGSRSIINLINAQSIKGELHDDTIVTLNRFWDTAQDVAMTCLT 124
            YG   +I S+Q A+ LLG     N++    +   + DD    +   WD +   ++ C  
Sbjct: 66  IYGFPGRIGSVQHALVLLG----YNVVRGLIVSTAVFDDMSRAMTGLWDHSVGCSLACGE 121

Query: 125 LAKRVGLENGDEAYALGLFHDCGVPLMLKQFPNYMSVLEQAYASASAECRVVDTENRLFN 184
           LA+ + L++ +E    GL HD G  +   Q P+    L+   ++     R  + E R+  
Sbjct: 122 LARTLALKDPEEYAVAGLLHDLGKVVTAVQLPDARKELDALVSAEDITYR--EAEKRVLG 179

Query: 185 TNHAVVGYYTSKSWRLPDHVSQAIANHHNAL 215
             H  +  +  + W LP  + + +A HH  +
Sbjct: 180 FAHDRINAWVGERWNLPAALREGMAWHHRPM 210