Pairwise Alignments

Query, 374 a.a., Ribosomal RNA large subunit methyltransferase G from Pseudomonas sp. RS175

Subject, 353 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 95/343 (27%), Positives = 136/343 (39%), Gaps = 31/343 (9%)

Query: 38  LAEQQPATSTRVLVLNDGFGALAASLAGKVNVISSSDSF---------LALQALEKNLVR 88
           +  Q+  +  +VLVLN     L  +L   ++V SS D+          LA QA  K    
Sbjct: 21  IRNQETLSQHKVLVLNHEADLLPKAL---LDVASSVDALALDYHHYLHLAPQANNKLRCY 77

Query: 89  NGRAFDAVPTLPASEPLVGPFDRVLIKVPKTLALLEEQLIRLQGQLAPGAQVIAAAMVKH 148
            G             P    ++ V++  PK   L           L P  Q++     K 
Sbjct: 78  FGHQL----------PHQNKYNTVIVYFPKAKPLAPYLFNLAAQHLVPNGQLLVVGENKG 127

Query: 149 LPRAAGDLLERYIGPVQASLAVKKARLLIATPADRAPAV--SPYPTRYLLEEPK--IELL 204
             ++   LL  Y          + + L  ++  D AP +  S + ++Y L  P+  I + 
Sbjct: 128 GIKSLVKLLPNYFAAGVKLDNARHSLLFGSSLIDTAPEITLSDWASQYQLSTPQGNITIC 187

Query: 205 NHANVFCREGLDIGTRAFLPHLPKNLGAAQVADLGCGNGVLAIASALQNPQAHYTLVDES 264
           N   VF  + LD GT   L HLP   G  +V D GCG GV+A       P      +D +
Sbjct: 188 NLVGVFSEKHLDQGTELLLSHLPTLSG--RVLDFGCGAGVIAATLLKAQPTLSLECIDIN 245

Query: 265 YMAVQSAAENWRAALGEREMTVRAGDGLAGQAAQSLDVVLCNPPFHQQQVVGDFLAWRMF 324
            MA+ S  E   AA G     V   DGLA Q +   D ++ NPPFH        +A R  
Sbjct: 246 AMALASC-ELTLAANGMMAK-VYPSDGLA-QTSGKFDGIISNPPFHDGLASTTNIAQRFV 302

Query: 325 QQAREALVVGGALYIVGNRHLGYHSKLARLFRGVEQVAATPKF 367
             + + L   G   IV NRHL Y   +A  F  +   A   K+
Sbjct: 303 ADSAKQLQSKGIWQIVANRHLPYSDTIAAEFGQLTVPAENNKY 345