Pairwise Alignments

Query, 565 a.a., Glutamine--tRNA ligase from Pseudomonas sp. RS175

Subject, 556 a.a., glutaminyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  694 bits (1791), Expect = 0.0
 Identities = 342/549 (62%), Positives = 409/549 (74%), Gaps = 9/549 (1%)

Query: 19  PVNFLRPIIQADLDSGKHTQIVTRFPPEPNGYLHIGHAKSICVNFGLAQEFGGVTHLRFD 78
           P NF+R II  DL+SGKHT++ TRFPPEPNGYLHIGHAKSIC+NFGLAQ++ G+ +LRFD
Sbjct: 10  PSNFIRNIIDEDLESGKHTRVHTRFPPEPNGYLHIGHAKSICLNFGLAQDYKGLCNLRFD 69

Query: 79  DTNPAKEDQEYIDAIESDVKWLGFEWSGEVRYASQYFDQLHDWAVELIKAGKAYVCDLTP 138
           DTNP KED +Y+++I++DV WLGF+W GE+RY+S YFDQLH +AVELI  G AYVC L  
Sbjct: 70  DTNPEKEDIDYVNSIQADVHWLGFQWDGEIRYSSNYFDQLHQYAVELINKGLAYVCFLNG 129

Query: 139 EQAREYRGSLTEPGRNSPFRERSVEENLDLFARMRAGEFPDGARVLRAKIDMASPNMNLR 198
           EQ REYRG+L EPG+NSP+R+  VEENL+LF +MR GEF +G   LRAKIDMASP M +R
Sbjct: 130 EQTREYRGTLKEPGKNSPYRDTFVEENLELFEKMRKGEFKEGECALRAKIDMASPFMCMR 189

Query: 199 DPIMYRIRHAHHHQTGDKWCIYPNYDFTHGQSDAIEGITHSICTLEFESHRPLYEWFLEH 258
           DP++YRIR AHHHQTGDKWCIYP YDFTH  SDA+E ITHS+CTLEF+ +R LY+W L++
Sbjct: 190 DPVIYRIRFAHHHQTGDKWCIYPMYDFTHCISDALEDITHSLCTLEFQDNRRLYDWVLDN 249

Query: 259 L---PVPAKPRQYEFSRLNLNYTITSKRKLKQLVDEQHVNGWDDPRMSTLSGFRRRGYTP 315
           L     P + RQYEFSRLNL YT+ SKRKL  LV    V+GWDDPRM T++G RRRGYTP
Sbjct: 250 LDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVVRGLVSGWDDPRMPTIAGLRRRGYTP 309

Query: 316 KSIRNFCEMVGTNRSDGVVDFGMLEFSIREDLDQSAPRAMCVLRPLKVVITNYPEGQVEN 375
            +IR FC  +G  + + +V+  ML+  IRE+L++ APRAM V+ P+KV+I NYPEGQVE 
Sbjct: 310 AAIREFCRRIGVTKQENMVEVSMLDACIREELNEHAPRAMAVINPVKVIIENYPEGQVEK 369

Query: 376 LELPCHPK-EDMGVRVLPFAREIYIDREDFMEEPPKGYKRLEPAGEVRLRGSYVIRADEA 434
           L  P HP  E MG R L F RE+YID +DF EE  K YKRL    EVRLR +YVI+A+  
Sbjct: 370 LSAPAHPTIESMGERELVFGRELYIDADDFREEANKKYKRLIQGKEVRLRNAYVIKAERC 429

Query: 435 IKDADGNIIELRCSYDPDTLGKNP-EGRKVKGVIHWVPAAASVECEVRLYDRLFRSPNPE 493
            KD  GN+  + C+YD  TLGKNP +GRKVKGVIHWV A ++V  E RLYDRLF  PNP 
Sbjct: 430 DKDEAGNVTTIYCTYDDQTLGKNPADGRKVKGVIHWVEATSAVPAEFRLYDRLFNQPNPA 489

Query: 494 KAEDSASFLDNINPDSLHVLTGCRAEPSLGNAQPEDRFQFEREGYFCADIKDSKPGAPVF 553
            AE     L   NP SL V  G   EP L NA+ E  +QFEREGYFCAD KDS P   VF
Sbjct: 490 AAETVDEVL---NPKSLVVKHGL-VEPGLVNAEAEKAYQFEREGYFCADSKDSSPEHLVF 545

Query: 554 NRTVTLRDS 562
           N TV LRDS
Sbjct: 546 NLTVALRDS 554