Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma factor FecI from Pseudomonas sp. RS175

Subject, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 74.3 bits (181), Expect = 1e-18
 Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 12/164 (7%)

Query: 14  FESHSNELLRFLTRQVKCEELAADLRQETWLRFRRRE---SGTEIGNLRA------FLYR 64
           F  H   L+ + T  V     A D+ QE WLRF       + TE G   A      +LY+
Sbjct: 11  FLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLYK 70

Query: 65  IARNLIIDYRRQQKSRPV--EEQISIELVSA-QPGPERAASDAQRLERLQRVVEGLPPHL 121
           I RNL +D  R+ K      +   S++ V+A  P PE+ A     L  + + +  LPP  
Sbjct: 71  IVRNLAVDLSRRLKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPRT 130

Query: 122 RQALLWNRLDGLTQREIGERLGVSESMAGRYILKALEHCQQQMD 165
           R A   +R +  T  EIG+RLG+S++ A   + +AL HC   +D
Sbjct: 131 RTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCLDHLD 174