Pairwise Alignments

Query, 272 a.a., Inner membrane ABC transporter permease protein YdcV from Pseudomonas sp. RS175

Subject, 275 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

 Score =  265 bits (678), Expect = 6e-76
 Identities = 131/259 (50%), Positives = 180/259 (69%)

Query: 14  LRLFGLLMIVFMIAPLLAVVPISFSSGTFLSYPLPGLSLRWYEKVFSAGPWLQSLRNSLL 73
           LR+   L+++F+I P+L +VP+SF+SG+FL YPL G S+RWYE +FS+  W++SL+NS+L
Sbjct: 17  LRILCALVLLFLIVPVLVIVPLSFNSGSFLVYPLQGFSMRWYEALFSSADWMRSLKNSML 76

Query: 74  VGCASTALATLLGTLAALAFARRNLPGATHVLALLISPMIIPPVISGLGMYFLFGQLGLT 133
           +  A+T LA +LGTLAA+   R    G   ++ +LISPM++P VI G+  Y  F  LG+ 
Sbjct: 77  IAPAATFLAVVLGTLAAVGLTRAEFRGKALLMTILISPMVVPVVIIGVASYLFFAPLGMG 136

Query: 134 GTLTGMILAHTVLATPFVLINVAASLQGLDMSLLRAAAMAGASPVRAFIDVALPIIAPGV 193
            +   +IL H VL  PFV+I V+A+LQG + +L+RAAA  GASP+ AF  V LP+IAPGV
Sbjct: 137 NSYLSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLTAFFRVTLPLIAPGV 196

Query: 194 ISGALFAFMTSFDEIVVVLFIGGPGQRTLPRQMFDGIRDTIDPSIVAMSSFLLVVGLLGL 253
           ISGALFAF TSFDE+VV LF+ GP Q TLPRQMF GIR+ + P+I A ++ L+   +  L
Sbjct: 197 ISGALFAFATSFDEVVVTLFLAGPEQITLPRQMFSGIRENLSPTIAAAATLLIGFSIALL 256

Query: 254 LATTWLSLRSNRSLNQPAA 272
           L   WL  R+ +   Q  A
Sbjct: 257 LTLEWLRGRAEKLRTQQPA 275