Pairwise Alignments

Query, 272 a.a., Inner membrane ABC transporter permease protein YdcV from Pseudomonas sp. RS175

Subject, 273 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  266 bits (681), Expect = 3e-76
 Identities = 131/252 (51%), Positives = 180/252 (71%)

Query: 14  LRLFGLLMIVFMIAPLLAVVPISFSSGTFLSYPLPGLSLRWYEKVFSAGPWLQSLRNSLL 73
           LR+   L+++F++ P+L +VP+SF+SG+FL YPL G SL+WY+  F++  W+++L+NS++
Sbjct: 17  LRIICTLVLLFLVLPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFNSAEWMRALKNSMI 76

Query: 74  VGCASTALATLLGTLAALAFARRNLPGATHVLALLISPMIIPPVISGLGMYFLFGQLGLT 133
           V  A+T LA   GTLAA+   R N PG   V+AL+ISPM++P VI G+  Y  F  LGL 
Sbjct: 77  VAPAATLLAMGFGTLAAIGLTRGNFPGKALVMALVISPMVVPVVIVGVASYLFFAPLGLG 136

Query: 134 GTLTGMILAHTVLATPFVLINVAASLQGLDMSLLRAAAMAGASPVRAFIDVALPIIAPGV 193
            + T +IL H VL  PFV+I V+A+LQG + +L+RAAA  GASP+ AF  V LP+IAPGV
Sbjct: 137 NSYTSLILVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGV 196

Query: 194 ISGALFAFMTSFDEIVVVLFIGGPGQRTLPRQMFDGIRDTIDPSIVAMSSFLLVVGLLGL 253
           ISGALFAF TSFDE+VV LF+ GP Q TLPRQMF GIR+ + P+I A ++ L+   ++ L
Sbjct: 197 ISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIGFSVVLL 256

Query: 254 LATTWLSLRSNR 265
           L   WL  RS +
Sbjct: 257 LVLEWLRGRSEK 268