Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. RS175

Subject, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  358 bits (920), Expect = e-103
 Identities = 199/525 (37%), Positives = 314/525 (59%), Gaps = 12/525 (2%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTNAKGVITYCNDAFVEISGFSKEELIGSPHNLVRHPD 60
           MRNNQPVTQ+E T+P    L+STT     I Y +  F +++G++ +EL+  PHN+VRHPD
Sbjct: 1   MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPD 60

Query: 61  VPSAVFAHMWNTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPIFEGNQVIGYESVRVKPTA 120
           +P   F  MW  LK G  WMG+VKNRCK+GDHYWV+A+ +PI E  +V+ Y+SVR+ P+ 
Sbjct: 61  MPPEAFKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSR 120

Query: 121 EQVSRAEALYRRINQGKPA----VPRSDKWLPILQDWLPFILVSQLSFIVGAFLNSSWGF 176
           + V  A+ LY+ I  GK      +PR+  W  +    L FI+ + +SF    F   + G 
Sbjct: 121 QHVDNADKLYKEIKAGKTPWQLKMPRTRLWQRL---GLGFIVAAGVSFAADRFFAGA-GL 176

Query: 177 ALAALLSVPLGLMGLQWQQRGIKRLLRLAEQTTSDPLIAQMYTDSRGVQARLEMSILSQE 236
            L  +L++   LM  Q+ +R ++ L + A +   +PL+  +Y       + +++++  ++
Sbjct: 177 PLMLVLTI---LMAYQFTRR-LETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQ 232

Query: 237 ARLKTCLTRLQDTAEHLNDQARQSNALAHNSSSGLERQRVETEQVATAVNQMAATTQEVA 296
           + L   + R+QD++  + + A+ S+  +  ++  L+ Q  ETEQ+ATA+ QM  T  E+A
Sbjct: 233 SELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIA 292

Query: 297 SHVQRTADATQEANRLTGRGRDIAGETREAIERLSVVVGETGQTVTQLAKDSDEIGGVVD 356
            + Q  +DAT  A      G     +T +AI  ++  +      + QL+  S  IG V++
Sbjct: 293 HNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVME 352

Query: 357 VIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHALIAKLQQ 416
           VI+ IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR+LAQR++EST +I  +I  +Q 
Sbjct: 353 VIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQT 412

Query: 417 TANNAVQTMDAGHRQAEEGVARVMEADQALVGISEAVANITDMTTQIAAATEEQSSVAEE 476
           +  NAV+T++ G++ +   V     +   L  +   V++IT    QIA A EE ++V E+
Sbjct: 413 STRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTED 472

Query: 477 ISRNISNISELADQTSDQAHNSALLSEELTRTANTQYSLVERFNR 521
           ++R++ +IS+++ +T   A N+     +L      Q SLV +F R
Sbjct: 473 MNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFRR 517