Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. RS175

Subject, 515 a.a., PAS domain-containing protein from Rahnella sp. WP5

 Score =  282 bits (722), Expect = 2e-80
 Identities = 193/536 (36%), Positives = 287/536 (53%), Gaps = 57/536 (10%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTNAKGVITYCNDAFVEISGFSKEELIGSPHNLVRHPD 60
           MRNNQP++QRE  +P    L+STT+A+  ITY NDAF+E+SGF+ E++IG PHN+VRHPD
Sbjct: 1   MRNNQPISQREYQYPDDATLMSTTDAESRITYANDAFIEVSGFASEDIIGQPHNVVRHPD 60

Query: 61  VPSAVFAHMWNTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPIFEGNQVIGYESVRVKPTA 120
           +P + F  MW TL+QG PW  +VKNR  +GDHYWV A V PI  G +  GY SVR KPT 
Sbjct: 61  MPPSAFKDMWATLQQGFPWTALVKNRRSNGDHYWVRANVVPIIRGGKTKGYLSVRTKPTT 120

Query: 121 EQVSRAEALYRRINQGKPAVPRSDKWLPILQD-WLPFILVSQLS--------FIVGAFLN 171
            +++  +ALY ++N+G+    R  + L I       F ++  LS         +V   LN
Sbjct: 121 AEINATQALYDKMNRGELNNRRLHRGLLIRTGITRSFSILKTLSVRWRIRNGLLVLLVLN 180

Query: 172 SSWGFALAAL----LSVPLGL---------MGLQWQQRGIKRLLRLAEQTTSDPL-IAQM 217
           S    AL AL    ++  L L           ++WQ      + R  EQ  S  L +A  
Sbjct: 181 SLVISALTALPVIQMNTALALNAFFILLLNFWMEWQ------ITRPVEQLCSQTLRVASG 234

Query: 218 YTDSRGVQARLE---MSILSQEARLKTCLTRLQDTAEHLNDQARQSNALAHNSSSGLERQ 274
            + +     R++   M++ S       C   + D    +NDQA +    + + ++G E  
Sbjct: 235 ASHTITPMERVDEIGMTLRSVGQLGLICRWMVDD----VNDQAHKVRTASESLANGNEAL 290

Query: 275 RVETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIERLSVVV 334
              TEQ A  V Q AA   E+++ V+       EA++L+      A +   A++    VV
Sbjct: 291 SQRTEQTAANVGQTAAAMNEMSTTVESNTQTAAEADKLSLIASAAAEKGSNAMQE---VV 347

Query: 335 GETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVR 394
           G    T+ ++   S +I  + +VI GIA QTN+LALNAA+EAARAGE G+GFAVVA EVR
Sbjct: 348 G----TMQEITGSSRQIATITNVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVR 403

Query: 395 QLAQRTSESTGQIHALIAKLQQTANNAVQTMDAGHRQAEEGVARVMEADQALVGISEAVA 454
            LAQR++ +  +I  LI       +++V+T+ +G +Q +       +A + +  I   V 
Sbjct: 404 SLAQRSASAASEIKRLI-------DSSVETVVSGSKQVD-------QAGKTMADIVSQVR 449

Query: 455 NITDMTTQIAAATEEQSSVAEEISRNISNISELADQTSDQAHNSALLSEELTRTAN 510
           N+T +  QI +AT EQ+    +I++ I  +  +  Q S Q    A  S  L + A+
Sbjct: 450 NVTSLIGQIRSATGEQNQGLLDIAKAIEELDRITHQNSIQVQEGANASSGLKQQAD 505