Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. RS175

Subject, 523 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  268 bits (685), Expect = 4e-76
 Identities = 181/536 (33%), Positives = 274/536 (51%), Gaps = 61/536 (11%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTNAKGVITYCNDAFVEISGFSKEELIGSPHNLVRHPD 60
           MR N P+T  ER     + ++S T+ +G I Y N  F+EISGF +EELIG+P N+VRHP+
Sbjct: 1   MRKNLPITTTERLLEDGKSIVSKTDLQGNILYVNPYFIEISGFEEEELIGAPQNIVRHPE 60

Query: 61  VPSAVFAHMWNTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPIFEGNQVIGYESVRVKPTA 120
           +P   FA MW TLK+GLPW G+VKNRCK+GD+YWV A VTP+ E  + +GY SVR +P+ 
Sbjct: 61  MPREAFADMWATLKEGLPWNGLVKNRCKNGDYYWVQANVTPVRENGRAVGYMSVRTRPSR 120

Query: 121 EQVSRAEALYRRINQG--------KPAVPRS--DKWLPILQD--------WLPFILVSQL 162
           EQV  AEA YR+ + G        + AV R+    WL  L++        W   +L   L
Sbjct: 121 EQVQAAEAAYRKFSAGQARGLRVHRGAVVRTGLTGWLQGLRELPVARRLGWTMGVLT--L 178

Query: 163 SFIVGA-----FLNSSWGFALAALLSVPLGLMGL--QWQQ------RGIKRLLRLAEQTT 209
            FI+G       + S+ G   A  L    G + L   W          ++R ++      
Sbjct: 179 MFILGGAVAGNAVMSAGGSPFAVWLGTAAGALMLLASWAMLHASIVAPLQRAIKAVHGLA 238

Query: 210 SDPLIAQMYTDSRGVQARLEMSILSQEARLKTCLTRLQDTAEHLNDQARQSNALAHNSSS 269
              L + + T +RG    L  ++      L+     + D   ++      +  +A+ +  
Sbjct: 239 GGDLDSHIDTTARGDMGLLLQALQQLNVNLRAI---IGDVRRNVESMTISTGEIANGNMD 295

Query: 270 GLERQRVETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIER 329
              R    TE  A+A+ + A++ +E A+ V++ AD+   A+R       IA     +++R
Sbjct: 296 LSGR----TEAQASALEETASSVEEFAATVRQNADSAANADRQAQSASAIAQRGGSSVQR 351

Query: 330 LSVVVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVV 389
           +       G+T+ ++   S +I  ++ +I GI+ QTN+LALNAA+EAARAGE GRGFAVV
Sbjct: 352 M-------GRTMEEIDAASHKIVDIIGLIDGISFQTNILALNAAVEAARAGEQGRGFAVV 404

Query: 390 ADEVRQLAQRTSESTGQIHALIAKLQQTANNAVQTMDAGHRQAEEGVARVMEADQALVGI 449
           A EVR LAQR++ +   I  LI              D    + E G   V E  QA+  +
Sbjct: 405 AAEVRTLAQRSAAAAKDIKGLI--------------DDSRAKVESGNQLVRETAQAMGEL 450

Query: 450 SEAVANITDMTTQIAAATEEQSSVAEEISRNISNISELADQTSDQAHNSALLSEEL 505
             AV N+     +I  A+ EQS   E++++ ++ I E   Q +     +A  +E L
Sbjct: 451 GGAVENMAVTMAEITVASNEQSGGIEQLNQAVNAIDETTQQNAALVEQAAAAAENL 506