Pairwise Alignments

Query, 521 a.a., Aerotaxis receptor from Pseudomonas sp. RS175

Subject, 514 a.a., PAS domain-containing methyl-accepting chemotaxis protein from Ralstonia sp. UNC404CL21Col

 Score =  268 bits (685), Expect = 4e-76
 Identities = 179/547 (32%), Positives = 278/547 (50%), Gaps = 62/547 (11%)

Query: 1   MRNNQPVTQRERTFPAQQRLISTTNAKGVITYCNDAFVEISGFSKEELIGSPHNLVRHPD 60
           MR N+PVTQRE  FP    L+STT+ +  I Y N AFVE+SGFS+EE+ G PHN+VRHPD
Sbjct: 1   MRVNEPVTQREYEFPDNATLMSTTDTQSYIAYANAAFVEVSGFSREEIEGKPHNIVRHPD 60

Query: 61  VPSAVFAHMWNTLKQGLPWMGIVKNRCKSGDHYWVNAYVTPIFEGNQVIGYESVRVKPTA 120
           +P   FA MW TLK G PW  +VKNR K+GDHYWV A  TP+    +  GY SVR KPT 
Sbjct: 61  MPPEAFADMWATLKAGQPWTALVKNRRKNGDHYWVRANATPVVRNGRTSGYMSVRTKPTR 120

Query: 121 EQVSRAEALYRRINQGKPAVPRSDKWLPI---LQDW------LPFILVSQLSF--IVGAF 169
           E+++ AEALY+    G+    +  K L +   L  W      +P     +L+F  ++ A 
Sbjct: 121 EEIAGAEALYKDFRTGQAGSRKFHKGLIVRTGLMAWRSGFQVMPVRWRIRLTFLTLLPAL 180

Query: 170 LNSSWGFALAALLSVPLGLMGLQWQQRGIKRLLRLAEQTTSDPLIAQMYTDSRGVQARLE 229
           +  +WGF ++      LG         G    L +A    S  L  Q+ T    +Q  L 
Sbjct: 181 VALAWGFGMS---GAALG---------GFAGALLVALALASWSLKVQIATPLEKLQ-ELA 227

Query: 230 MSILSQEARLKTCLTRLQDTA-----------------EHLNDQARQSNALAHNSSSGLE 272
           +S+ S E+R      R+ +                   + + +Q     + +   + G  
Sbjct: 228 LSVASGESRKVAIADRVDEIGMTLRTISQLGLMFRWLIDDVAEQVVNVQSASQEIAKGNG 287

Query: 273 RQRVETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIERLSV 332
              + TEQ A ++ + +++  ++ + V   A+   +AN L+G     A     A+E++  
Sbjct: 288 DINIRTEQAAASLEETSSSMTQMTATVASNAETAGQANTLSGEATQAAVNGGRAMEQVVA 347

Query: 333 VVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADE 392
                  T++ +++ + +I  ++ VI  IA QTN+LALNAA+EAARAGE GRGFAVVA E
Sbjct: 348 -------TMSAISQSAKQIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGE 400

Query: 393 VRQLAQRTSESTGQIHALIAKLQQTANNAVQTMDAGHRQAEEGVARVMEADQALVGISEA 452
           VR LAQR++ +  +I  LI         +V  +++G R  +       +A + +  I E 
Sbjct: 401 VRALAQRSAGAAKEIKELI-------GTSVDKVESGSRLVD-------DAGKTMDDIVEQ 446

Query: 453 VANITDMTTQIAAATEEQSSVAEEISRNISNISELADQTSDQAHNSALLSEELTRTANTQ 512
           V  ++ M   I+ AT +Q+    ++S+ ++++ ++  + +     SA  +E L   A   
Sbjct: 447 VKKVSAMIADISLATAQQTEGITQVSQAVNHLDQVTQENATLVGQSAAAAEGLRIQATRL 506

Query: 513 YSLVERF 519
              V  F
Sbjct: 507 VEAVNVF 513