Pairwise Alignments

Query, 688 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 670 a.a., flagellar biosynthesis protein FlgK from Pseudomonas fluorescens FW300-N2E3

 Score =  739 bits (1909), Expect = 0.0
 Identities = 383/689 (55%), Positives = 507/689 (73%), Gaps = 20/689 (2%)

Query: 1   MSLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNVFIGSGTTLA 60
           MSLLNIGMSGLSA+ ++L  TGNNIANVDTAGYSRQQTVQ++KAS QYGNVFIG+GTTLA
Sbjct: 1   MSLLNIGMSGLSAASSSLAVTGNNIANVDTAGYSRQQTVQSSKASIQYGNVFIGTGTTLA 60

Query: 61  DVRRVYNSYLEAQLKTTTSLNSDAAAYQGQITPLDSLLSDSGTGLNGALTKFFASVQNVN 120
           DVRRVYN+YL+ QL+ TTSL+SDA AY  Q+T +D LLSDSGTG+   +  FF+S+Q ++
Sbjct: 61  DVRRVYNAYLDKQLQLTTSLSSDAQAYLSQVTQVDKLLSDSGTGITKVMQSFFSSLQTLS 120

Query: 121 AKPGDDASRQLLLSDAQALSNRFNSVASQLTAQSETINGNLSNMVEQINNLATTVAQLNK 180
           + P D A+RQ LL+++Q+LS+RFN+++ QL  Q   IN  + +MV+Q+N LA+T+A  N+
Sbjct: 121 STPNDAAARQALLTNSQSLSSRFNAMSDQLKQQGSYINAQMGSMVDQVNKLASTIATYNQ 180

Query: 181 KIAEVSNSGGAPNDLLDARSETIRQLSTFTGTQVVENGSSLDIYLGSGQPLVMGNITNKL 240
           KI   + +G APNDL+D R+ET+RQLS   GTQVVE   S DIY+  GQPLVMG+  N L
Sbjct: 181 KITAANGTGSAPNDLMDQRNETVRQLSQLVGTQVVERDGSYDIYMTGGQPLVMGSTANSL 240

Query: 241 EAVPDKNDPGRMGIQLNSGSSVMDLTQVLTGGEIGGLMRYRSTVLDPAMNELGRVALVVA 300
           +   DK+DP R  I +N G S +D+T  +TGGE+GGL+RYR  VL PA N LGR+A+VV+
Sbjct: 241 QVSTDKSDPTRSSIIMNRGFSTLDITSAVTGGEMGGLLRYRDDVLAPATNALGRIAMVVS 300

Query: 301 DQMNTIQASGIDKNGAFGSNLFSNINSTAQMSQRSVAALSNSAGSGNFNVSIEDTGKLTT 360
           DQ+N     G+D+NG FG+ LFSNINS   +SQRS+A+ +N+  SGN NV+I+DT KL+T
Sbjct: 301 DQVNRQLGQGLDQNGEFGAALFSNINSATAISQRSIASSNNNPASGNLNVTIQDTSKLST 360

Query: 361 NDYKVTFTSATGYIVQRLPDGTSMGAFSTTTTPPPVIDGFSMTFANGT-AAAGDSFKITP 419
           +DY+VTFTSATGY V+RL D T MG+F+   +P PVIDGFS++  +    +AGD+FKITP
Sbjct: 361 SDYQVTFTSATGYSVKRLSDNTDMGSFTLGASPAPVIDGFSLSLNSAAGVSAGDNFKITP 420

Query: 420 TRNAAGSIKTEMTDSKRLAIAAPLGAAIVPGGSGTLTIPASGQPTMTTKLDIYDEATTTI 479
           TR+ AG + T MTD+KRL+ +APL + +  G  GT ++    QPT+T+ LDIY+   +  
Sbjct: 421 TRSGAGDLSTVMTDTKRLSTSAPLTSTLAQGNKGTGSV---SQPTLTSTLDIYNPVQSQD 477

Query: 480 IQNGIKSSMPVKVVFGVTSADGTSQAYQLLDAQGGTLSSGTIKPGQSNTLSLSVPLKDAS 539
           +QN IK++MPV+++  +TSA+    AY++LDA+G +L +G+I PGQSN LS+ VP  D+ 
Sbjct: 478 MQNAIKTAMPVRML--MTSAN----AYEVLDAKGNSLGTGSIVPGQSNKLSIPVPYTDSL 531

Query: 540 GNPIMDSSVPPVQRTVTFDMSIAGAPSNGAGIDISLSQPGSLDNRNGTALAGLQTAKTVD 599
           G            +   F+M+++G P +G   ++S++   S DNRN  AL GLQ+  TV 
Sbjct: 532 G----------AAQNFNFEMTVSGNPVSGDSFNVSMTAASSTDNRNAQALLGLQSKATVG 581

Query: 600 TGSASKGISLNDAYGKLVEGVGAKAAQGKLDSAATGAILNNAKNARDSLSGVDLDEETGN 659
             + S G+S +DAYG LV  VGAKA QG++D  A   +L  A  ARDSLSGVDLDEETG+
Sbjct: 582 ATTTSPGVSFSDAYGGLVSEVGAKAKQGQMDGTANDTLLKGAAAARDSLSGVDLDEETGH 641

Query: 660 LVKFQQYYTASSQIIKAAQEIFSTLINSL 688
           LVKFQQYY+ASSQIIKAAQEIFSTLINSL
Sbjct: 642 LVKFQQYYSASSQIIKAAQEIFSTLINSL 670