Pairwise Alignments

Query, 688 a.a., hypothetical protein from Pseudomonas sp. RS175

Subject, 641 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella sp. ANA-3

 Score =  299 bits (766), Expect = 2e-85
 Identities = 219/696 (31%), Positives = 330/696 (47%), Gaps = 66/696 (9%)

Query: 1   MSLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNVFIGSGTTLA 60
           + LLNI  +G+ ASQ+ L  T NNIAN +TAGY RQ   Q+T  S + GN F G+GT + 
Sbjct: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVD 62

Query: 61  DVRRVYNSYLEAQLKTTTSLNSDAAAYQGQITPLDSLLSDSGTGLNGALTKFFASVQNVN 120
           DV+R+YN Y   +L+   +  S A A  G+++ LD L S  G  +  +L   F  + ++ 
Sbjct: 63  DVKRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQIGKMVPQSLNSLFTGLNSLA 122

Query: 121 AKPGDDASRQLLLSDAQALSNRFNSVASQLTAQSETINGNLSNMVEQINNLATTVAQLNK 180
             P D   R   L+DA+ L+N  N + S L  Q    N  ++ M ++IN ++  +A LN 
Sbjct: 123 DLPADLGIRSSTLNDAKQLANSLNQMQSSLNGQMTQTNDQITGMTKRINEISKELANLNL 182

Query: 181 KIAEVSNSGGAPNDLLDARSETIRQLSTFTGTQVV--ENGSSLDIYLGSGQPLVMGNITN 238
           ++ +  N       LLD +   I++LS +    V+  ENG+   I LG    LV G I  
Sbjct: 183 ELMKSPNQDAM---LLDKQDALIQELSQYAQVNVIPQENGAK-SIMLGGSVMLVSGEIAM 238

Query: 239 KLEAVPDKNDPGRMGIQLNSGSSVMDLTQVLTGGEIGGLMRYRSTVLDPAMNELGRVALV 298
            ++       P  + +  + GS  +       GG++G L  YR   L PA +EL ++AL 
Sbjct: 239 TMDTKTGDPFPNELQLTSSIGSQSVAADPSKLGGQLGALFEYRDQTLIPASHELDQLALG 298

Query: 299 VADQMNTIQASGIDKNGAFGSNLFSNINSTAQMSQRSVAALSNSAGSGNFNVSIEDTGKL 358
           +AD  N +QA G D NG  GSN+F +IN    MS   V   SN+ G+    V+I+DT  L
Sbjct: 299 IADNFNKMQAQGFDLNGQVGSNIFRDINDPL-MSLGRVGGYSNNTGNATLGVNIDDTRLL 357

Query: 359 TTNDYKVTFTSATGYIVQRLPDGTSMGAFSTTTTPPPVID---GFSMTFANGTAAAGDSF 415
           T   Y+++FT+   Y ++     T  G  +  T     ++   GFS+    G  A+GD F
Sbjct: 358 TGGSYELSFTAPASYELR----DTETGVITPLTLNGSTLEGGAGFSIDIKAGAMASGDRF 413

Query: 416 KITPTRNAAGSIKTEMTDSKRLAIAAPLGAAIVPGGSGTLTIPASGQPTMTTKLDIYDEA 475
            I PT  AA  I  EMTD K +A A+P            +T  A+       KL      
Sbjct: 414 VIRPTAGAANGITVEMTDPKGIAAASP-----------KITADAANSGNTQVKL------ 456

Query: 476 TTTIIQNGIKSSMPVKVVFGVTSADGTS--QAYQLLDAQGGTLSSGTIKPGQSNTLSLSV 533
             T I N   ++ P+         D T+    Y+  DA G +L +             + 
Sbjct: 457 --TQITNRSAANFPITGSELTIQLDTTAIPPTYEAFDASGTSLGAAA---------PYTP 505

Query: 534 PLKDASGNPI-MDSSVPPVQRTVTFDMSIAGAPSNGAGIDISLSQPGSLDNRNGTALAGL 592
           P   A G    +DS+        TF+++ A                   DN N  A+A L
Sbjct: 506 PSISAFGFTFEVDSTAAASNDRFTFNLAFAEG-----------------DNSNAVAMAKL 548

Query: 593 QTAKTVDTGSASKGISLNDAYGKLVEGVGAKAAQGKLDSAATGAILNNAKNARDSLSGVD 652
             +K ++ G +    +L D +      +G+K    ++   +  AI   A    +S SGV+
Sbjct: 549 SESKVMNGGKS----TLADVFENTKIDIGSKTKAAEVRVGSAEAIYQQAYARVESESGVN 604

Query: 653 LDEETGNLVKFQQYYTASSQIIKAAQEIFSTLINSL 688
           LDEE  NL++FQQ Y AS++I+  AQ+IF TL+ S+
Sbjct: 605 LDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSV 640