Pairwise Alignments

Query, 172 a.a., ECF RNA polymerase sigma factor SigE from Pseudomonas sp. RS175

Subject, 187 a.a., Sigma-70 region 2 from Pseudomonas syringae pv. syringae B728a

 Score =  223 bits (567), Expect = 2e-63
 Identities = 122/170 (71%), Positives = 135/170 (79%)

Query: 1   MSQSRFHHVFLAQRTPLLRTLERMVNNPSTAEDLLQETYLRVTRALNERTVDHLEPFVFQ 60
           +S S F++VFLAQR  LLRTL+RMV N STAEDLLQET+LRV+RAL E  V HLEPFVFQ
Sbjct: 16  VSHSDFNNVFLAQRPVLLRTLQRMVGNQSTAEDLLQETWLRVSRALTEHPVAHLEPFVFQ 75

Query: 61  TARNLALDHLRARRIQSRTLLEDVPVDVVNNVVAPQSSAEDAAHAGRMLERLNVSLQALS 120
           TARNLALDHLRARRI  RT+LEDV    + NVVA   S EDAAHA R+LE L+ SL  LS
Sbjct: 76  TARNLALDHLRARRIHGRTMLEDVSPARLENVVAQLGSPEDAAHAKRLLENLSASLSTLS 135

Query: 121 SRQQQIFMLSRLQGHAYQEIAERLGVSPSTVQKELKLIMAICIGVAERLD 170
            RQQ+IF LSRL G +Y EIAE+L VS STVQKELKLIMAICIGV  RLD
Sbjct: 136 PRQQKIFTLSRLDGRSYLEIAEQLQVSASTVQKELKLIMAICIGVLSRLD 185