Pairwise Alignments

Query, 307 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Pseudomonas sp. RS175

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas fluorescens FW300-N2C3

 Score =  340 bits (872), Expect = 2e-98
 Identities = 170/303 (56%), Positives = 227/303 (74%), Gaps = 5/303 (1%)

Query: 7   FFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGID 66
           F QQL+NGLT+GS Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y+A I+LA LA  GI+
Sbjct: 5   FLQQLINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIE 64

Query: 67  SLPLLMTAAFVASIIVTSAYGYSIERVAYRPLRSSNRLIPLISAIGMSIFLQNTVLLSQD 126
           S PL++    V +I+VT  YG+ IERVAY+PLR+S RL PLISAIG+S+ LQN   +SQ 
Sbjct: 65  SFPLMILGTLVFTIVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124

Query: 127 SKDKSIPNLIPGS--FSFGPGGAEEVLVSYMQILVFVVTLVAMLGLTLFISRSRLGRACR 184
           ++ + +P L+ G+  F FG G  +   ++Y +I + +     M  LT  I  ++LGR CR
Sbjct: 125 ARQQGVPTLLEGAMRFDFGSGFVQ---LTYTKIFILIAAFAGMGVLTYIIKYTKLGRMCR 181

Query: 185 ACAEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFTA 244
           A  +D KMA++LGINT+ +I+  F+IGAA+AA+A VL++M YG  +  AGF++G+KAFTA
Sbjct: 182 ATQQDRKMASILGINTDRVISYVFIIGAAMAALAGVLITMNYGTFDFYAGFIIGIKAFTA 241

Query: 245 AVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEV 304
           AVLGGIGS+PGAMLGG++LG++E+  + +    YKDV +F LLVL+L+FRP G+LGRP V
Sbjct: 242 AVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVLILIFRPQGLLGRPLV 301

Query: 305 EKV 307
            KV
Sbjct: 302 AKV 304