Pairwise Alignments

Query, 307 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Pseudomonas sp. RS175

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  285 bits (730), Expect = 7e-82
 Identities = 153/305 (50%), Positives = 211/305 (69%), Gaps = 10/305 (3%)

Query: 6   HFFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGI 65
           +F QQLVNGLT+GS Y +IAIGYTMVYGIIGMINFAHG+++M+G + A I    L    I
Sbjct: 3   YFVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTF-I 61

Query: 66  DSLPLLMTAAF--VASIIVTSAYGYSIERVAYRPLRSSNRLIPLISAIGMSIFLQNTVLL 123
             +P+++      V  ++  + + ++IERVAYRPLR S RL PLI+AIGMSI L N + +
Sbjct: 62  AGVPVVLALLIMMVVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQV 121

Query: 124 SQDSKDKSIPNLIPGSFS-FGPGGAEEVLVSYMQILVFVVTLVAMLGLTLFISRSRLGRA 182
           +Q  ++K IP L+   +  FG      + VS  QI++ V+T + +      ++R+ LGRA
Sbjct: 122 TQGPRNKPIPPLVSSVYDLFG------ISVSLKQIIIVVITAILLSVFWYIVNRTPLGRA 175

Query: 183 CRACAEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAF 242
            RA  +D KMA LLG++ +  I++TF++GAALAAVA  +  M YGV+    GF  G+KAF
Sbjct: 176 QRATEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPGVKAF 235

Query: 243 TAAVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRP 302
           TAAVLGGIGS+PGA+LGGL++G+ E+  +  F   YKDV  F +L +VL+F+P+GILGRP
Sbjct: 236 TAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFSILAIVLIFKPSGILGRP 295

Query: 303 EVEKV 307
           EVEKV
Sbjct: 296 EVEKV 300